Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00315 ATGGCTTCCACCATTGCTTCGACAATGCCTTCCACCTCCACCGAGCCCGACCCCGACGCCGCCGTCAGGGCGGTGAGGAAGCGCTACGAGGGCCTTCTGACAGTGCGCACGCGGGCGATCAAAGGCAAAGGCGCGTGGTACTGGGCCCACCTCGAGCCCATTCTCATCGGCAACGCGGTGAAGCTCAAGTGCTCCCTCTGTGATTCTATCTTCTCTGCCTCCAACCCTTCTCGAACCGCTTCCGAGCATCTCAAGCGTGGGACGTGTCCCAACTTCAACCACTCTTCGCTGCCTTCACCCTCGCCTATTTCCACCGTGCACTCCCACTCCAACAACGGCAGAAAGAGAACCTCCACCTCAACCTCTCCGAATCAGGACCGGTCCGTTCAGCATTTGGTGTTGTCCGGTGGGCAAGATGATTTGTGTGCTCTCGCTGTTTTCGAAGACAGCGTGAAGAAGCTTAAGAGTCCTAGGAATTTGTCGCATGTTGCTCCTCCTGAGTTGACCAATGACCAGGTTAACTCCGCTGTTGGATTGTTGGCAGATTGGTTCTACGAGTCTTGTGGCTCTGTGCCTCTCTCTGCCCTTGAACATCCCAAGTTTCAGTCCTTTCTCACCCAGCTGGGTTTGCCGGTGGCTCTGTTGAGACGCGAGATATATGGTTCTAGGCTCGAGGATAGGTTCGGGGTGGCCAAGGCTGAGTCCGAAGCTAGAATCAGAGAGGCACTGTTTTTTCAAGTCGGGTGTGATGCTTGGAAGGGCGAGGATGGTGTGGTGAAGTTTATAGTGAATCTTCCCAATGGGACTAGCGTGTTCCACAAGGTGGTGCTAAATGGAGGCGAGGTGTCGTCTAAGTATGCTGAGGAGATTTTGTGGGAGGTGGTGAGGGGTGTTTGTGGGAGTGATGTGGAGAGGTGTGTAGGGATCGTTTCAGACAGGTTTAAGGGTAAGGCGTTGAGGAACTTGGAGGCTCAGAACCATTGGATGGTGAATGTTGCTTGTCAGGTTCACGGGTTCACGGGTTTGATCAGGGATTTTAGCAGCGGGCTCCCACTTTTCCGGGTTGTCACTGAAAATTCTCTCAAGGTTGCTAATTTTATCAACACTGAGTCTCAGGTTAGGGGTAGTTTTCTCAGGTACCGGATGCAGGAGCTGGAGTGTACTGGGTTGGTTCGAGTTCCCTCACCCAGATGTAATGTGTCGAAGGACTTTGCATCTGTGTTTCCAATGTTGGAGGACATCCTGAGCTGTGCTGCAGTGATCCAAATGGTGGTGATGGAGGACGCGTTTAAGGTGGTGTGTATGGAGGACCCATTGGCCAGAGAGATTGCCGAGATTGTTCAGAGTGAGGGGTTTTGGAGTGAACTAGAGGCGGTTTATGCGCTGGTGAAGCTCATCAGAGGAGTAGTTCAGGACATGGAGGCGGAGAGGCCGTTGGTTGGTCGGTGTTTGCCTCTCTGGGAGGAGGTAAGAGCGAAGGTGAAGGAGTGGTGCGTTAAGTATAGTGTTGCAGTAGAACCTGTGGATGAAATACTTGAAAAACGGTTCAGGAAGAACTATCACCCTGCATGGTCAGCTGCATTTATACTTGATCCGCTATACTTGGTTAAAGATGCAAATGGAAAGTACCTTCCTCCATTCAAGTGCTTAACTCGTGAACAAGAGAAAGATGTAGATAAGTTATTGACGAGGCTGGCTTCACGAGAAGAAGCTCATGTTGTGTTGATGGAGCTCATGAAGTGGAGATCAGAAGGGCTTGACCCTCTTTATGCACAGGCTGTGCAGATGAAACAACAAGACCCCATTACAGGGAAGATGAAGGTAGCAAATCCACTCAGCAGTAGACTTGTTTGGGAAACTTGCCTCAGTGAGTTTAATTCCCTACGCAAGCTCGCCGTGAGGCTCATTTTTCTGCATGCAACATCATGTGGCTTTAAGAGCAATTTTTCTTTCATCAGGAAGGTTTCTGCCCATAAGCAGTCGAAAATTTCCTTGGAAAGAGCTCAGAAAATGATATGCATTGCAGCTCATGCCAAGCTTGAAAGACGAGACTTTTCCAATGAGGAAGAGAGGGAGGCAGAATTGCTTGCCATGGAAGGTAGTGATGATGGCATGCTGGCTGAAGTCTTTGCAGATGCACCCCTAATGTAA 2151 0.5058 MASTIASTMPSTSTEPDPDAAVRAVRKRYEGLLTVRTRAIKGKGAWYWAHLEPILIGNAVKLKCSLCDSIFSASNPSRTASEHLKRGTCPNFNHSSLPSPSPISTVHSHSNNGRKRTSTSTSPNQDRSVQHLVLSGGQDDLCALAVFEDSVKKLKSPRNLSHVAPPELTNDQVNSAVGLLADWFYESCGSVPLSALEHPKFQSFLTQLGLPVALLRREIYGSRLEDRFGVAKAESEARIREALFFQVGCDAWKGEDGVVKFIVNLPNGTSVFHKVVLNGGEVSSKYAEEILWEVVRGVCGSDVERCVGIVSDRFKGKALRNLEAQNHWMVNVACQVHGFTGLIRDFSSGLPLFRVVTENSLKVANFINTESQVRGSFLRYRMQELECTGLVRVPSPRCNVSKDFASVFPMLEDILSCAAVIQMVVMEDAFKVVCMEDPLAREIAEIVQSEGFWSELEAVYALVKLIRGVVQDMEAERPLVGRCLPLWEEVRAKVKEWCVKYSVAVEPVDEILEKRFRKNYHPAWSAAFILDPLYLVKDANGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQQDPITGKMKVANPLSSRLVWETCLSEFNSLRKLAVRLIFLHATSCGFKSNFSFIRKVSAHKQSKISLERAQKMICIAAHAKLERRDFSNEEEREAELLAMEGSDDGMLAEVFADAPLM 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00315 716 PANTHER OSJNBA0013A04.12 PROTEIN 25 681 - -
Spst10g00315 716 MobiDBLite consensus disorder prediction 1 15 - -
Spst10g00315 716 MobiDBLite consensus disorder prediction 1 20 - -
Spst10g00315 716 MobiDBLite consensus disorder prediction 77 127 - -
Spst10g00315 716 SUPERFAMILY Ribonuclease H-like 273 682 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00315 Spst-Chr10 3149952 3152102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00315 - - gmx:100790244 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03051 4 69869545 69871983 Spst10g00315 10 3149952 3152102 ECH
Spst10g00315 10 3149952 3152102 Spst10g00315 10 3149952 3152102 ECH
Spst4g03051 4 69869545 69871983 Spst10g00315 10 3149952 3152102 PCT