Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00304 ATGTTCTACCTCCTCAAAAGATTTTGCCTTCTATGTTTCCTTTTCTTACCCTTTGATGTCTCACTCTGTTCATGTGCTTCACTCAGAGACTTGGCTTCTTGCTTTGTTAATCACAATATAAAAAACTTTACCACGCTCCCTTACGGTGAACATGACCAATCCTCTACCCTCAATTACTTCAAAATTCTTAATTTTTCCATTCAAAACCTTCGCTTCGCAGAGCCCGTGATTCCTAAGCCAATGGCCATTGTACTGCCAGAGAGTTTAGAGAAGCTGCAGAAAAGTGTGGAATGCAGTAGAGAAAGTTCCATGGAAATCAGAGTAAGATGTGGTGGACACAGCTATGAAGGGACTTCGTATGTGGCTGACGATGGCACTCCTTTTGTCATCATTGATATGATGAATTTGAACCATGTTTGGGTGGACATGGAGACAGAAACAGCATGGGTTGAAGGTGGTGCAACATTGGGAGAGACTTACTATGCAATCTCTCAAGCAAGCAATGAACATGGATTCTCAGCTGGATCGTGTCCAACTGTTGGCGTTGGAGGGCACATTGGTGGTGGTGGTTTTGGGTTGTTGTCTAGAAAATATGGTCTTGCTGCAGACAACGTGGTGGATGCCCTTCTTGTTGATGCTGATGGAAAACTGTTGGACCGAGAAACCATGGGAGAAGATGTATTTTGGGCTATTAGAGGAGGAGGAGGTGGTCTATGGGGGATCATTTATGCCTGGAAAATCCAGGTGTTGAAAGTGCCAGAGGTTGTAACTAGTTTCACTGTATCAAGAACAGGCACAAAAAATCATGTTGCCAATCTAGTGCACAAATGGCAACATGTGGCACCCAACTTGGAAGATGACTTCTATTTGTCATGCTTTGTTGGTGCTGGTTTGCCCCAAGCTAAAACCAAAGGGTTATCAATAAAACTCAATGGTTTCTTTCTTGGTCCTAGAGCCGGTGCAATATCCATTCTAAACCAAGCTTTTCCCGAGTTGGGTGTTGTAGAAGAAGAATGCACAGAAATGAGTTGGATTCAGTCAATTGTTTTCTTCTCCGGCCTAAGTGATGGAGCCTCAGTCTCTGACTTGAAGAACAGGTATCTGCAAGAAAAAGAATATTTCAAGGCCAAATCAGATTATGTAAAAAACCATATTCCTCTTGTGGGCATAGAAACTGCTCTGGACATCCTCGAAAAGGAACCAAAGGGATATGTTATTCTGGACCCTTATGGTGGAAAGATGCATAATATAAGCAGTGAAGCTATTGCTTTTCCCCATAGAAGAGGAAACCTGTTTACAATTCAGTATCTGATCTATTGGAAAGAAGCTGACAATGACAAAAGCAGTTACTATGTTGATTGGATAAGAGGGTTCTATGATGCTATGACTTCCTTTGTTTCAAGGGGTCCAAGGGCTGCATATATTAATTACATGGACTTTGACCTTGGAGTGATGAAGAGGATAAGCAATGGTGGTAATGTGAAAGATGTCGTGGAAAGTGCAAGGGTTTGGGGTGAAAAGTACTTCTTGAGCAACTACGATAGACTGGTGAGGGCTAAAACTAGGATTGATCCTCACAATGTTTTCAGCAATGAACAGGGCATTCCTCCCATGTCTTTGGCCTCTCCCGATATCAAAACACTCCAATCAATGTTAGTAACCAATTCAATCTAG 1674 0.4229 MFYLLKRFCLLCFLFLPFDVSLCSCASLRDLASCFVNHNIKNFTTLPYGEHDQSSTLNYFKILNFSIQNLRFAEPVIPKPMAIVLPESLEKLQKSVECSRESSMEIRVRCGGHSYEGTSYVADDGTPFVIIDMMNLNHVWVDMETETAWVEGGATLGETYYAISQASNEHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLVDADGKLLDRETMGEDVFWAIRGGGGGLWGIIYAWKIQVLKVPEVVTSFTVSRTGTKNHVANLVHKWQHVAPNLEDDFYLSCFVGAGLPQAKTKGLSIKLNGFFLGPRAGAISILNQAFPELGVVEEECTEMSWIQSIVFFSGLSDGASVSDLKNRYLQEKEYFKAKSDYVKNHIPLVGIETALDILEKEPKGYVILDPYGGKMHNISSEAIAFPHRRGNLFTIQYLIYWKEADNDKSSYYVDWIRGFYDAMTSFVSRGPRAAYINYMDFDLGVMKRISNGGNVKDVVESARVWGEKYFLSNYDRLVRAKTRIDPHNVFSNEQGIPPMSLASPDIKTLQSMLVTNSI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00304 557 Pfam Berberine and berberine like 473 536 IPR012951 GO:0016491|GO:0050660
Spst10g00304 557 SUPERFAMILY FAD-binding/transporter-associated domain-like 70 253 IPR036318 GO:0050660
Spst10g00304 557 Gene3D - 255 469 - -
Spst10g00304 557 ProSiteProfiles PCMH-type FAD-binding domain profile. 76 252 IPR016166 GO:0071949
Spst10g00304 557 Gene3D - 30 136 IPR016167 -
Spst10g00304 557 Pfam FAD binding domain 80 218 IPR006094 GO:0050660
Spst10g00304 557 Gene3D - 141 537 IPR016169 -
Spst10g00304 557 PANTHER OS08G0158400 PROTEIN 27 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00304 Spst-Chr10 3062969 3064642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00304 29 536 Miscellaneous Gene Families AT1G30760 41.992 1.51e-132 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00304 - - gmx:100776134 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00304 10 3062969 3064642 Spst10g00304 10 3062969 3064642 ECH