Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00302 ATGTCAGGCTCAGCAGATCCATTAGTGATATCATTCGGTGAGATGCTCATCGACTTTGTCCCTGACTCATCTGGTGTCTCCTTGGCTGAGTCTTACGCTTTTATCAAAGCCCCTGGAGGTGCTCCTGCCAATGTTGCTTGTGCCGTAGCCAAACTTGGTGGCAATGCTGCCTTCATTGGCAAGGTGGGAGATGATGAGTTTGGAAAGATGCTAGTTGATATTCTGAGGAAAAACAAGGTGAACATTGATGGTGTTTGCTTTGACACGGAAGCAAAAACTGCTTTGGCTTTTGTGACATTGAGGAAGGATGGAGAGAGGGAGTTCATGTTTTACAGAAATCCCAGTGCAGATATGATGCTGGCGGAGTCAGAATTGAACATGGGTTTGATCAAGAAGTGTAAGATATTTCATTATGGATCCATTAGCCTGATAGCAGAGCCATGCAGATCAGCTCACTTGGCTGCCATGAAAGTTGCTCGTGCTAATGGTGCTTTCCTCTCCTATGATCCAAATGTGAGGCTTCCTTTGTGGCCTTCTGAGGAGGCTGCTAGATCTGGGATCAAGAGCATTTGGTTTGAGGCGGACTTCATCAAGGTGAGTGATAACGAAGTTGAATTTCTAACACAAGGTGATCCTGAGAAGGAAGACGTTGTCATGTCCCTGTGGCACGACAAATTGAAGTTGCTTCTTGTCACTGATGGAGAGAAGGGTTGCAGATATTTCACTAAGAAATTCAAAGGAAGGGTGACTGGATTTTTAGTGAAGGCAGTTGACACAACTGGTGCTGGTGATTCTTTTGTTGGTGCACTTCTCACAGCTGTGGCCAGGGACAGCTCCATATTTGAGAATGAACAGAAAATGAGAGAGACTTTGACCTTTGCAAATGCTTGTGGAGCAATGTGTACAACACAGAAGGGTGCAATTCCTGCACTTCCAACCACCAAAGATGTTGAGAAATTTATTTCCGACTCTAAAGCCAAATAG 984 0.4492 MSGSADPLVISFGEMLIDFVPDSSGVSLAESYAFIKAPGGAPANVACAVAKLGGNAAFIGKVGDDEFGKMLVDILRKNKVNIDGVCFDTEAKTALAFVTLRKDGEREFMFYRNPSADMMLAESELNMGLIKKCKIFHYGSISLIAEPCRSAHLAAMKVARANGAFLSYDPNVRLPLWPSEEAARSGIKSIWFEADFIKVSDNEVEFLTQGDPEKEDVVMSLWHDKLKLLLVTDGEKGCRYFTKKFKGRVTGFLVKAVDTTGAGDSFVGALLTAVARDSSIFENEQKMRETLTFANACGAMCTTQKGAIPALPTTKDVEKFISDSKAK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00302 327 PANTHER HEXOKINASE FAMILY MEMBER 8 321 - -
Spst10g00302 327 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016301
Spst10g00302 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016301
Spst10g00302 327 Gene3D - 5 327 IPR029056 -
Spst10g00302 327 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Spst10g00302 327 SUPERFAMILY Ribokinase-like 9 321 IPR029056 -
Spst10g00302 327 CDD bac_FRK 8 308 - -
Spst10g00302 327 FunFam Probable fructokinase-2 6 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00302 Spst-Chr10 3043644 3045437 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00302 K00847 - gmx:100791294 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00302 10 3043644 3045437 Spst10g00302 10 3043644 3045437 ECH