Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00003 ATGGACCAGCTTCAATCACCCACCACCAAAGATGCCCACAATGCCAATCCTGAACCTTCCAACTCCAGCAATGACGAACCACTCTTTGAAGAATTTGACAGCACCTGCTCTACGCCTTATGTCAGTGCCCCTTCCAGTCTCGGTCGTGGGCTCCCCGGATTCTTTTACAGCGCCCCCGCCAGTCCTATGCACTTCGCCATAACCGCAGCATCCTCCTACGACAACACTTCCTCTTCCGCTCCAATGGGTTACGAGTTCGAATTTTCCGCCCGGTTTAGCTCAGTCGGTTCAGCGGGCTCAGGTTCCATGAGCTCTGCAGACGAGTTGTTCCTGAACGGTCAGATCCGCCCCATGAAGCTCTCGACTCACCTTGAACGTCCCCAAGTTCTCGCTCCGTTGTTGGATCTGGAAGGAGAAGAAGAAGAAGAGGAAGAATCCGAAGCAGTTAGTGTCAGCGTGGTCCGAGGCAGAGATCTGAGGCTGCGGGACAAGTCTGTTAGGAGGAGAACCAGATCCATGTCCCCTCTCCGAAGCAACACCCCTTTGGAGTGGGCAGAGAACGAGGAGGATCCTGTTATTTACGGAGATCACAGCGTTAGCGTGAGCTCGGGGAAGCAAATCGATGTTAGTTCGTCCGAAGTGGAGAACAGAAGGGAGAAAGCGGAGGATAGTCTGGGTGTAGGTTTGGAGACAACTCCCTCGGTCTCAGGTTCGGCTTCGTCCTCTCGCTCCTCTTCAGCTGGTAGAAGCTCGAAGCGTTGGGTATTCTTAAAGGACTTTCTCCGAAGCAAAAGCGAAGGAAGGAGTAACAACAAGTTCTGGTCCACCATTTCTTTCTCCCCAACCAAAGACAAGAAACCCGCCACTTCCACTACTCAAACTCAGAATGCCCCAACAAACATAAAAAACGGGCCTTCTTCTTCGGAAGCCCCGCAGAAGTCGAAAGGAAGTAGTTCTCAGGCTTGGGCCCGAAGAATGAGCGGGAAGCCTACCAACGGTGTAGGGAAAAGGCGCGTGCCACCTTCGCCGCACGAGTTGCATTATAAAGCGAACCGGGCCCAATCAGAGGAGTTGAGGAAAAAGACCTTTCTGCCCTACAGGCAGGGTCTGCTTGGGTGCTTGGGCTTTAGTTCGAAGGGTTATGGTGCCATGAATGGCTTCGCTAGAGCCCTAAACCCTGTTTCCTCCAGGTAA 1194 0.531 MDQLQSPTTKDAHNANPEPSNSSNDEPLFEEFDSTCSTPYVSAPSSLGRGLPGFFYSAPASPMHFAITAASSYDNTSSSAPMGYEFEFSARFSSVGSAGSGSMSSADELFLNGQIRPMKLSTHLERPQVLAPLLDLEGEEEEEEESEAVSVSVVRGRDLRLRDKSVRRRTRSMSPLRSNTPLEWAENEEDPVIYGDHSVSVSSGKQIDVSSSEVENRREKAEDSLGVGLETTPSVSGSASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPTKDKKPATSTTQTQNAPTNIKNGPSSSEAPQKSKGSSSQAWARRMSGKPTNGVGKRRVPPSPHELHYKANRAQSEELRKKTFLPYRQGLLGCLGFSSKGYGAMNGFARALNPVSSR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00003 397 MobiDBLite consensus disorder prediction 271 326 - -
Spst10g00003 397 Pfam Protein of unknown function (DUF1645) 106 365 IPR012442 -
Spst10g00003 397 PANTHER OS07G0619500 PROTEIN 33 386 - -
Spst10g00003 397 MobiDBLite consensus disorder prediction 195 250 - -
Spst10g00003 397 MobiDBLite consensus disorder prediction 229 250 - -
Spst10g00003 397 MobiDBLite consensus disorder prediction 271 344 - -
Spst10g00003 397 MobiDBLite consensus disorder prediction 211 225 - -
Spst10g00003 397 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00003 Spst-Chr10 32802 33995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00003 - - pvu:PHAVU_007G200400g 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02322 1 31899058 31900035 Spst10g00003 10 32802 33995 ECH
Spst10g00003 10 32802 33995 Spst10g00003 10 32802 33995 ECH
Spst1g02322 1 31899058 31900035 Spst10g00003 10 32802 33995 PCT