Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08265 ATGCAAGACATGAGAGACTGCTACGATAGCTTGCTTTCCGCGGCAGCAGCGGCCGCCAACAGTGCTTATGAGTTCTCAGAGTCCTTGGGTGAATTGGGCTCTTGTCTTCTTGAGAAAACCGCCTTGAACGAAGATGAAGAAAGCGGAAAAGTTCTGCTAATGCTGGGCAAAATGCAGTTTCAACTCCAGAAGCTCATTGATAACTATGTCAGTCAGTCCTTATGGCATCCCTACAAGTTTAACAATTCAATTCCTTCCATTTTCTATGCTTTTCTTAATTTTGCTTTGCAATTTCAGCGCTCTCATTTAACCCAGACGATTATCACTCCATCAAACTCTCTTTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGACATTGTGATGAAAAAAGAGAAGTATATGAGTACATGTTAACAAGATATAGAGAAAGAGGTCGATCTAGAAGCAGAAAAGAAGAGTCTTTTTCCTTGCAGCAGTTGCAAACTGCTTGTGATGAATATGATGAGGAGGCTACATTATTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCATGGAGTCTTCTAACACAAGCAGCACGTCACCATGCTGCTCAGTTGTGTTTCTTCAAGAAAGCAGTTAAGTCTCTTGAGACTGTAGAGCCACACGTGAAATCTGTAACTGAGCAGCAACACATTGACTACCACTTCATTGGTCTTGAAGAGGAGGATGAGGATGATCATATAGATGATGACGATAACGGTTATGATGAGAATGATGACAGGGAGCCGAGTTTTGACTATGAACAAAATGAACACGAGCAGGATGTTTCTACATCACAAACCTCAATAAAGAATTTTTTAATTCTTATGAATATGCATGATGAATATCTGTTGTTTTATATACAGGAAAACTTAGATAGGCTTCACAGAAATTCATTCCCCTTCAGGTTTAGGTCAGTAAGCCAATCTGCCCCACTTTTTGCTGATAATAAACCTGATTCTTGTGAAAAGATGAGACAGTTACGACCATCTTTATCACGGAAGTTCAATTCATATGTGCTACCCACACCAGTTGATGCAAAGAGTGCAATATCTTCAAGGTCAAGTAATCAAGTACCTTCCAAAATGAAGACAAATTTAAAAGAGCCTGCAAAAAAATTGAGGCATTCGTCCCCACTGGAACAAAAGAAATATGAAAGTGTTTTTGGGGATAAGGTTCTTTCTGGTTCTAATGTTAGAAATGCCCAGTCTGCACTCAAGGAGAGTAACAGCAATACCACCTACACAAAATTGTCACCTCCTTTAATTGATGGTATTTTATCCTCAAATCGGGATTTTGTTGCTGCTTACTCTAAAAAGATTAAAAGACATGCCTTTTCTGGTCCATTGACAAATAATTTATGGCCAACCAAGCCTGCCTCAGTAGAAAGTGTTCAATTATTTTCTGGACCTCTTTTGCAGACTCCAATTCCACTGCCTTCATCAGCATCTCGAAAGGTATCTCCTAGTGCTTCTCCTACTTTTGCATCTTCACCTAAAATAAGTGAGCTTCATGAACTTCCAAGGCCTCCCACCAATTCCCCATCCAATTCAAGGCTTTTAGGTTTGGTGGGTCATTCAGGTCCATTGGTATCCAGAGGTCAGAAGCATTCTGCTCTAAATAATTTGGTTACATCAAATGCAGCATCTCCATTGCCAATGCCTCCTCAGGCCATGGCTCGAAGTTTCTCCATACCTTCTGGTGGTGCTAAAGTATTAACTATATACGAGGATATTGCTTCTCCTCCTCTGACGCCAATTGCCTTATCTAGTAGTCGGCCATCATCAGTTGCCTCTGAGACTGTTGCTCGGGCTGTTTAG 1848 0.4064 MQDMRDCYDSLLSAAAAAANSAYEFSESLGELGSCLLEKTALNEDEESGKVLLMLGKMQFQLQKLIDNYVSQSLWHPYKFNNSIPSIFYAFLNFALQFQRSHLTQTIITPSNSLLNELRIVEEMKRHCDEKREVYEYMLTRYRERGRSRSRKEESFSLQQLQTACDEYDEEATLFVFRLKSLKQGQSWSLLTQAARHHAAQLCFFKKAVKSLETVEPHVKSVTEQQHIDYHFIGLEEEDEDDHIDDDDNGYDENDDREPSFDYEQNEHEQDVSTSQTSIKNFLILMNMHDEYLLFYIQENLDRLHRNSFPFRFRSVSQSAPLFADNKPDSCEKMRQLRPSLSRKFNSYVLPTPVDAKSAISSRSSNQVPSKMKTNLKEPAKKLRHSSPLEQKKYESVFGDKVLSGSNVRNAQSALKESNSNTTYTKLSPPLIDGILSSNRDFVAAYSKKIKRHAFSGPLTNNLWPTKPASVESVQLFSGPLLQTPIPLPSSASRKVSPSASPTFASSPKISELHELPRPPTNSPSNSRLLGLVGHSGPLVSRGQKHSALNNLVTSNAASPLPMPPQAMARSFSIPSGGAKVLTIYEDIASPPLTPIALSSSRPSSVASETVARAV. 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08265 615 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 100 612 IPR037488 -
Seca8g08265 615 MobiDBLite consensus disorder prediction 358 386 - -
Seca8g08265 615 SUPERFAMILY BAR/IMD domain-like 95 221 IPR027267 -
Seca8g08265 615 Gene3D Arfaptin homology (AH) domain/BAR domain 1 245 IPR027267 -
Seca8g08265 615 MobiDBLite consensus disorder prediction 489 508 - -
Seca8g08265 615 CDD BAR 23 218 - -
Seca8g08265 615 MobiDBLite consensus disorder prediction 489 525 - -
Seca8g08265 615 MobiDBLite consensus disorder prediction 239 260 - -
Seca8g08265 615 MobiDBLite consensus disorder prediction 239 274 - -
Seca8g08265 615 MobiDBLite consensus disorder prediction 358 373 - -
Seca8g08265 615 SUPERFAMILY BAR/IMD domain-like 2 72 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08265 Seca-Chr8 180366430 180370319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08265 - - gmx:100784870 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08265 8 180366430 180370319 Seca8g08265 8 180366430 180370319 ECH