Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08264 ATGGAAGAGAAATACAAAACCCTAGAAGTTGCGGAGAAGATCCCAAAATCTGGTGTATTTTATCTTAACTTGAATCGTCCCTCAAAACGTAACGCTCTTACGCATGATTTCTTCTCTGAATTCCCGAAAGCCCTGTATGCACTCGATCACAACCCCGACGTCAAAGTCATTGTCTTGTCAGGTGCTGGCAACCACTTCTGCGCCGGCATCGACCTTTCCCTTTTGGAATCTACCGCTGCTAATTCAAATTCCGGTGAGAGTCTGCGGCGGCAGATCCTGGCGATGCAAGATTCCGTGACGGCCCTCGAACGATGCCGAAAACCCGTGATTGCTAGTATACACGGAGCTTGCATCGGTGGTGGGATTGATATCATAACTGCCTGTGACATAAGGTTCTGTACGAAGGACGCATTCTTTTCAGTGAAAGAGGTGGATTTGGCCCTGGCGGCTGATCTCGGAACTCTTCAGAGGTTGCCCAGTATTGTGGGCTTCGGCAACGCCATGGAGTTAGCTTTGACGGCTCGCACGTTCTCTGGTTTGGAGGCTAAGGAGTTGGGCCTGGTTTCTCGCGCTTTCCATTCCAAACAGGAGCTGGATGAGGGCGTCAGGGATGTTGCTCACGCAATTGCTACCAAGTCCCCCCTTGCAGTTATTGGGACAAAAACAGTGTTGCTTAGAAGTAGGGACTTGACGGTGGATCAGGGGTTGGATTTTGTTGCCACCTTGAATTCTGCGAGATTGTTATCCAGTGACTTAACTGAAGCAGTTATGGCACAGATGCAGAAACGAAAGCCAGTGTTTTCCAAGCTCTAA 813 0.4945 MEEKYKTLEVAEKIPKSGVFYLNLNRPSKRNALTHDFFSEFPKALYALDHNPDVKVIVLSGAGNHFCAGIDLSLLESTAANSNSGESLRRQILAMQDSVTALERCRKPVIASIHGACIGGGIDIITACDIRFCTKDAFFSVKEVDLALAADLGTLQRLPSIVGFGNAMELALTARTFSGLEAKELGLVSRAFHSKQELDEGVRDVAHAIATKSPLAVIGTKTVLLRSRDLTVDQGLDFVATLNSARLLSSDLTEAVMAQMQKRKPVFSKL. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08264 270 CDD crotonase-like 18 209 - -
Seca8g08264 270 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 110 130 IPR018376 GO:0003824
Seca8g08264 270 SUPERFAMILY ClpP/crotonase 16 268 IPR029045 -
Seca8g08264 270 FunFam Delta3,5-delta2,4-dienoyl-CoA isomerase 1 210 - -
Seca8g08264 270 FunFam Delta3,5-delta2,4-dienoyl-CoA isomerase 211 270 - -
Seca8g08264 270 PANTHER ENOYL-COA HYDRATASE 2 270 IPR045002 GO:0016853
Seca8g08264 270 Pfam Enoyl-CoA hydratase/isomerase 16 268 IPR001753 -
Seca8g08264 270 Gene3D - 212 270 IPR014748 -
Seca8g08264 270 Gene3D - 8 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08264 Seca-Chr8 180362432 180363944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08264 3 207 Acyl Lipid Metabolism Gene Families AT5G43280 66.981 1.61e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08264 K12663 - gmx:100804855 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08264 8 180362432 180363944 Seca8g08264 8 180362432 180363944 ECH