Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08260 ATGCTGGAGAGAGAAAAAGATAGGAAGATGGTGACTGTGTTGCACGGTTGTGTGATCATAACGATGGACGGAGAGCAGCGAGTGTTTAGAAACGGTGGCATCGTCATCGAACAAGATAAAATCAAAGCCATTGGGCAATCTGTCCATATTCTTGCTGAGTTCTCTCACGTCGCCGACCACGTTATTGATCTCACCGGCCATATCTTGCTTCCTGGATTTATCAACACCCACGTTCATACTTCCCAACAACTTGCGAGAGGCATAGCCGATGATGTTGACTTAATCACCTGGTTGCACGATCGTATTTGGCCTTATGAATCCAACATGACTGAACACGATTCTTACCTCTCTACTCTGCTTTGCGGGATCGAACTCATTCACTCTGGTGTAACCTGTTTTGCTGAAGCTGGTGGTCAACATGTTTCTGGGATGGCTAGAGCAGTCCACTTACTGGGTTTGCGTGCTTGTTTAACCCAGTCCACTATGGATTCTGGCCATGGTTTGCCATCATCCTGGGCCACTCGAACCACTCATGATTGCCTTCAGTCTCAAAAGGACAATTATGAGAAGCACCACAATACAGCCCAAGGGCGCATCAGAATCTGGTTTGGAATTAGGCAAATTATGAACTCCACTGATCGCTTGCTTCTTGACACAAGAGATGCTGCAAGACAACTGAAAACAGGAATACACATGGTACTCATCTCTGTTTATATGCACGGAGTGGCATGTCTTTTTGGTGAAATCAGTCAAAGGCTTTGGGAGAACACCTATGTCCTCTATGGAACACCACATGTTGCAGAGATACCATATGAGAATCAAGTAGTCATGGATGTTCACAAAATAAATCATGGAACTGTTACATACTTGGAGAAGATAGATTTCCTTCAAAACAATCTGTTAGCAGCTCACTCAGTTTGGGTTGATAATAACGAGATATCTCTTCTTTCAAGGGCAGGGGTCAAAGTATCTCACTGTCCTGCTGCTGCAATGCGAATGCTTGGATTTGCACCTGTAAGGGAGATGCTTGATGCTGGCATATGTGTCTCCATAGGAACTGATGGGGCCCCATCAAACAATCGCATGAGCATTGGTTCATCTTAA 1104 0.4493 MLEREKDRKMVTVLHGCVIITMDGEQRVFRNGGIVIEQDKIKAIGQSVHILAEFSHVADHVIDLTGHILLPGFINTHVHTSQQLARGIADDVDLITWLHDRIWPYESNMTEHDSYLSTLLCGIELIHSGVTCFAEAGGQHVSGMARAVHLLGLRACLTQSTMDSGHGLPSSWATRTTHDCLQSQKDNYEKHHNTAQGRIRIWFGIRQIMNSTDRLLLDTRDAARQLKTGIHMVLISVYMHGVACLFGEISQRLWENTYVLYGTPHVAEIPYENQVVMDVHKINHGTVTYLEKIDFLQNNLLAAHSVWVDNNEISLLSRAGVKVSHCPAAAMRMLGFAPVREMLDAGICVSIGTDGAPSNNRMSIGSS. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08260 367 PANTHER AMINOHYDROLASE SSNA-RELATED 10 364 - -
Seca8g08260 367 SUPERFAMILY Metallo-dependent hydrolases 71 364 IPR032466 -
Seca8g08260 367 Gene3D - 73 236 - -
Seca8g08260 367 Gene3D - 252 366 - -
Seca8g08260 367 Pfam Amidohydrolase family 265 364 IPR006680 GO:0016787
Seca8g08260 367 Pfam Amidohydrolase family 68 232 IPR006680 GO:0016787
Seca8g08260 367 SUPERFAMILY Composite domain of metallo-dependent hydrolases 13 80 IPR011059 GO:0016810
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08260 Seca-Chr8 180324905 180328455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08260 - - gmx:100500128 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08260 8 180324905 180328455 Seca8g08260 8 180324905 180328455 ECH