Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08024 ATGGAGGGATTGGGAGGACTTGGGCATCTATTAGTGACAATGTTTGTGACTGGAATAGGAGGTGTGATTGTTATACCAGCAATCACCGATGTCACCATGGCTGCACTCTGCCCTGGCCAAGATCAGTGCTCCCTCGCCATTTACCTCTCTGGCTTCCAGCAAGCTGTGATTGGAGTGGGGTCGGTTGTGACGACGCCATTAATAGGAAACTTGTCTGACCGATACGGCAGGAAAGCCTTTCTCACACTTCCTCTCATCGTCTCCATCATCCCTCAAGTCATATTGGCATATAGCAGGGCTACGAAATTCTTCTACGCCTATTATGTGGTGAAAACTCTTGCTGCCATTGCAGGCGAAGGCAGCTTCCATTGCTTAGCTCTTGCATATGTGGCAGACAAAGTTCCAGATGGGAAACGAGCATCAGCATTTGGAATACTTGCTGGTGTTGGATCAGCTTCATTTGTTGGTGGAACATTAGCTGCTCGTTTCCTACCAACTGCTTTGACATTTCAGGTTGCTTCAGTGTTCTCAATGATTGCATTGGTGTACATGAGAATTTTCCTTAAGGAAAGTGTAACTGATGGTGGCATGAGGCAGCCATTGTTGAAAGAGGGTGAGGAACCATGTGTTGAACAGTGTGAGGATGGTTCATCACAAAGGACAACAGGAACATTTAAGAAACTGCCTTCAATGGGGGATTTAATTTGTTTGCTCAAGTGTAGCCCCACATTCTCAAAAATAGCAGCTGTTTTGCTCTTCAATAGTCTTGCAGATGGGGGCTTGATGGCTACATTGATGTATTATTTAAAGGCACGTTTTCAGTTCAACAAGAACCAGTTTGCGGATTTGATGATAATTTCTGGGATTGGAGCAACTCTTACACAACTATTTTTCATGCCCATATTAGTACCTGCAATAGGAGAGGAGAAATTGCTCTCCACAGGGCTCTTAATTAGCAGCATAAATATCTTAATCTACAGCATATCATGGTCAGCATGGGTTCCTTATGCTCTAGCAGGTGCCTCTGTTTTTGGAGTTTTTATTCGCCCAAGTATATGCAGCATTGCATCAAAACAAGTTGGACCTACTGAACAGGTATCCTAA 1104 0.442 MEGLGGLGHLLVTMFVTGIGGVIVIPAITDVTMAALCPGQDQCSLAIYLSGFQQAVIGVGSVVTTPLIGNLSDRYGRKAFLTLPLIVSIIPQVILAYSRATKFFYAYYVVKTLAAIAGEGSFHCLALAYVADKVPDGKRASAFGILAGVGSASFVGGTLAARFLPTALTFQVASVFSMIALVYMRIFLKESVTDGGMRQPLLKEGEEPCVEQCEDGSSQRTTGTFKKLPSMGDLICLLKCSPTFSKIAAVLLFNSLADGGLMATLMYYLKARFQFNKNQFADLMIISGIGATLTQLFFMPILVPAIGEEKLLSTGLLISSINILIYSISWSAWVPYALAGASVFGVFIRPSICSIASKQVGPTEQVS. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08024 367 Pfam Major Facilitator Superfamily 11 365 IPR011701 GO:0022857|GO:0055085
Seca8g08024 367 CDD MFS_SLC46_TetA_like 12 365 - -
Seca8g08024 367 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 7 366 - -
Seca8g08024 367 SUPERFAMILY MFS general substrate transporter 10 362 IPR036259 -
Seca8g08024 367 Gene3D MFS general substrate transporter like domains 6 367 IPR036259 -
Seca8g08024 367 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 367 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08024 Seca-Chr8 177799251 177807531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08024 2 365 Organic Solute Cotransporters AT2G16990 43.316 2.90e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08024 - - gmx:100805770 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08024 8 177799251 177807531 Seca8g08024 8 177799251 177807531 ECH