Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08021 ATGGGCAGCTTGAAAAACACAGCATCATCAACAAGCAGTCCAAAGAAAAATAGTCCAAGAACACTTCATGATCTATTTGTGCAAGAGAAGCCTCTTTTCCCTATTTCATCTTCTCCTACTACTTCAGGAAATGAAGAACTTCTCTCTTCTATTTCTTATTGCACCTTTGTTTTCACTTTCACTGACCCTTCAGAGTCTCCTGCACAGAGAGACTCAAAGAGGCTCCAACTCTCAAGGCTCATTGCTATGTTGAAGTCCTCCAAGAAGCCATTGCATGAAAAAGTTTTGGGACCTTTAGTTGCCATGATCTCAGCCAATCTCTTCAGGCCACTTCCTCCACCTGCCAACCCTTCAGCAATCTCAGATTTGCTTGAAGAAGAAGACCCCATTTCCACATTTTCACCCATTTGGTCACATCTCCAAGTAGTTTATGAAATCCTTCTCAGGCTTGTTAACTTCACAGACCCAAAAGTACTGAGAGAGTACATAGATCATTCTTTCCTACACAATCTCCTAGCACTCTTCCAGTCTGAAGATCCAAGGGAACGTGAAAGTTTGAAAAATGTGTATCACAAGATATATTCTAAGTTCATCTCTGACCGTTCCATGATGAGGAAATCAATGACTGATGTGTTGTTGAACTATGTTTTTGAGACAGAGAAGCATCCTGGTATTGCAGACTTGCTTGAGATATGGGGAACTATAATCAATGGCTTTACAGTGCCACTCAAGGAAGAGCACAAGTTGTTCCTCATGAGAGTGCTTATTCCTCTACACAAGACTAAAGGGGTGCAAGTGTATCATAGGCAATTGGCTTATTGTGTATCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGGGTTGTTGTTAGAGGGATTTTGAGATATTGGCCTGTCACAAATTGTCAAAAAGAAATCTTGCTAATTGGGGAATTGGAAGATCTGGTGGAGAATTTAGACCCTGATCAGTATCGGAAGTTGGCCTTGCCAATATGTACACAGATTACAAAATGCATAAACAGTTGGAATTCCCAGGTAGCTGAGCGTGCACTCTATGTATGGAACAATGAGCAGTTCTATAAAATGGCATCAACAGGAACAGTAGAAGTATTTCCTGTGATAGTAGAAGGCATGGAAAAGAACCTGAAGTGGCATTGGAGCAAGAGCGTTCGGCAACTAACAGAAAGTGTCAAGGTGATGTTGGAAGATATGGATCCAGATCTATATGCTAAGGTTCTCATGGACATCAAAACTAAAGAATCAGAGGCACATCAACAAGATATGGAGAGAAAAAAGAGATGGGAAAAAATAGAATTAGCAGCTGCTAAGAGTGAGTTTCTCAATCCACAACGTTATATATGTGTCTCCCACTGA 1374 0.4112 MGSLKNTASSTSSPKKNSPRTLHDLFVQEKPLFPISSSPTTSGNEELLSSISYCTFVFTFTDPSESPAQRDSKRLQLSRLIAMLKSSKKPLHEKVLGPLVAMISANLFRPLPPPANPSAISDLLEEEDPISTFSPIWSHLQVVYEILLRLVNFTDPKVLREYIDHSFLHNLLALFQSEDPRERESLKNVYHKIYSKFISDRSMMRKSMTDVLLNYVFETEKHPGIADLLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGVQVYHRQLAYCVSQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPICTQITKCINSWNSQVAERALYVWNNEQFYKMASTGTVEVFPVIVEGMEKNLKWHWSKSVRQLTESVKVMLEDMDPDLYAKVLMDIKTKESEAHQQDMERKKRWEKIELAAAKSEFLNPQRYICVSH. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08021 457 MobiDBLite consensus disorder prediction 1 21 - -
Seca8g08021 457 Gene3D - 39 439 IPR011989 -
Seca8g08021 457 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 40 439 - -
Seca8g08021 457 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 28 443 IPR002554 GO:0000159|GO:0007165|GO:0019888
Seca8g08021 457 MobiDBLite consensus disorder prediction 1 19 - -
Seca8g08021 457 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 35 441 IPR002554 GO:0000159|GO:0007165|GO:0019888
Seca8g08021 457 SUPERFAMILY ARM repeat 45 423 IPR016024 -
Seca8g08021 457 PIRSF PP2A_B56 3 454 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08021 Seca-Chr8 177785178 177787453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08021 K11584 - gmx:100802007 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08021 8 177785178 177787453 Seca8g08021 8 177785178 177787453 ECH