Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08016 ATGGGATGTGTTGCTTCCAAACTAGAGGAAGAAGGGGAAGTGGTAGCTATTTGTAGAGAGAGAAAACGCCAGTTAAAGCTAGCTGTGGAGAAAAGATATGCACTTGCAGAGGCTCATTGTAAGTATTTTCACTCTCTGAATGCAGTAGCTGCGGCCATTAAGCTCTTTGTTGCACGCCATTCTTCACCTTCATCAACTTTCCTCATAACTTTCCCTCCTCCTTGCCCTACTTCCACTCCACCAACTGAAAATGTGATAACCAACCCTATGTTCCTCCAGCAGACACCATCAGAAACCAAGCATGAAGCTATTGCTTGTGACTCTTGCATTCCTTCAACAACCTCTGAGTCTTCTGAGGAAGAGAGTGAAGAAAAAGGGGAGGGAGAAGATGAGTGTAGGAGAGAAGTGCAAGATGAACAGCCATGTGGGTACTACTACATGCATATGCCTATGCCACCTTCAATGCCATCTCCACAGAGGGATTTTGGGTGGGATTTCTTCTACCCATTTGACAGTATGAGGACAGAGGTTATCAGTGGCTACCACAGGAACTCAGATGATGATCTGAGGGCAGTGAGAGAGGAAGAAGGGATTCCAGAGTTAGAGGAGGAAGTAGAAAGGGAAGAGCTTGAGCACAAGGTGATGAGTGTTGAAGAGAATAATGAAGGCTCAGAGCAAGTGATGATGAATAGTGTTGAAACGGTGAAGGTGGTGGACTTGGCTACTGAAAACAATGGGGAGCAGAAGGGGCTTGCAGTTCTTGATACACCACCTGAGGGGAGAGAGTTGCTTGAAGCTTTGAAAGATATTGAGGACCATTTTATCAGGGCTTATGATTCTGGCAAGGATGTATCCAGGATGCTGGAGGCTAATAGAATTCCTCTTCATTCTAGTTTGGAGGAAATAAAAGAAAGTTCAACCAAACTCATTCATGCAATAACATGGAAGTCCATTTCATCTAGGCCATCATCATGCAAGAGTCTCATAGTTCCAAATATGAGAAATTCTTCAACTTGGGTGGAATATAAGAATGATCTATTTGATGATTATGGAGGAATGGATTCAGGAAGTCATTTGCTAACCTTAGGAAGGTTATATGCATGGGAAAAGAAGCTTTTTGAGGAGGTTAAGGCTGGAGATAGCACGCGAAAAAATTATGAGAAAAAATGCACGCAGTTGAGAAATAAGAATGTTAGAGGAGATGATGAGCTAAGCACGGACAAAACTAAAGCTGAAGTGAAAGATCTATATGCTGGGATCTTGGTTGCAATTCGACGAGCAGAGTCAATCTCAAAGAGGATTCAGAAAATGAGAGATGAAGAATTACAGCCTCAAATTGTTGAACTATTAAAAGGCCTGACACAATCATGGAAGATTATGTTGGAGTCCCATGAAACACAGAAGAAGATTCTTTCCGAAGTCAAATATTTCACATGTCCCACGTATGACAAATTTTGCAATCAATCTCGTGGAATGGCAATTCTTCAGCTTGAAGCTGAGCTTCACCATTGGCGTGTGTGCTTTAGGGAGTATGCTGCAGCTCAAAAAGCATATGTTGAAGCTCTGCATGGATGGTTGACTAAGTTCATAGTCCCTGAAGTTGAATTTTACTCAAGAAGCAAAAACATTGCCATGCCGTATCTCAACGGGCCACCACTACTTGTGATATGCAATGATTGGTTAGCCTCCATGCAGAAGCTACCTGATAAAATGGTATCACTTGCATTGAAAAGCTTTGTGAAGGATGTGAGAGCTCTGTGGCTTCAACAAAGTAAAGAGCAGCAGCAGAAAAGGAAAGTAGACAGCCTAACAAAAGATTTAGACAAAAGATATTCAGGGTCGCATAAAGTGAAGACTAAGATGCTTGAGTTGCAAGCTACAGAACACAAATCAGAAGAGGGAACAGAACATCAAGATGAATGCATGGTAGAGAAGAATGATCATTTGGAGACACTAAGAAGAAAACTGGAGGTAGAGAAGGAGAAGCACCACAATTGCATGCAAGAAACGCAGAGGATCACATTAAATGGATTGCAATCTGGTTTTTCTCTAGTCTTTGAATCTTTAACAGAGTTCTCTAAAGCATCCCAAAATATGTACAATGATCTTGTAACTTATAGTGAAAATAGTGAGAAGGCTGGGAACATGACGTATATAGAGGGTGGTTGCGATGATGAAAATTGCAACAGCCAAAATGGACTGTAG 2205 0.4177 MGCVASKLEEEGEVVAICRERKRQLKLAVEKRYALAEAHCKYFHSLNAVAAAIKLFVARHSSPSSTFLITFPPPCPTSTPPTENVITNPMFLQQTPSETKHEAIACDSCIPSTTSESSEEESEEKGEGEDECRREVQDEQPCGYYYMHMPMPPSMPSPQRDFGWDFFYPFDSMRTEVISGYHRNSDDDLRAVREEEGIPELEEEVEREELEHKVMSVEENNEGSEQVMMNSVETVKVVDLATENNGEQKGLAVLDTPPEGRELLEALKDIEDHFIRAYDSGKDVSRMLEANRIPLHSSLEEIKESSTKLIHAITWKSISSRPSSCKSLIVPNMRNSSTWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYEKKCTQLRNKNVRGDDELSTDKTKAEVKDLYAGILVAIRRAESISKRIQKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCPTYDKFCNQSRGMAILQLEAELHHWRVCFREYAAAQKAYVEALHGWLTKFIVPEVEFYSRSKNIAMPYLNGPPLLVICNDWLASMQKLPDKMVSLALKSFVKDVRALWLQQSKEQQQKRKVDSLTKDLDKRYSGSHKVKTKMLELQATEHKSEEGTEHQDECMVEKNDHLETLRRKLEVEKEKHHNCMQETQRITLNGLQSGFSLVFESLTEFSKASQNMYNDLVTYSENSEKAGNMTYIEGGCDDENCNSQNGL. 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08016 734 MobiDBLite consensus disorder prediction 107 136 - -
Seca8g08016 734 Pfam Protein of unknown function (DUF632) 263 584 IPR006867 -
Seca8g08016 734 Coils Coil 642 669 - -
Seca8g08016 734 Coils Coil 191 227 - -
Seca8g08016 734 PANTHER UNCHARACTERIZED 1 708 - -
Seca8g08016 734 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08016 Seca-Chr8 177730277 177735075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08016 151 607 Acyl Lipid Metabolism Gene Families AT2G27090 29.981 6.46e-55 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08016 - - gmx:100807897 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08016 8 177730277 177735075 Seca8g08016 8 177730277 177735075 ECH