Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08002 ATGGAAACAAAACAAGTTACCATTGTTGAAGATATTGTGATTGTGGGAGCTGGCATTGCTGGCCTTACATCATCACTGGGACTTCACAGGTTGGGTGTCCGAAGTTTGGTGTTAGAATCTTCAGATAGTCTGAGGGTCACTGGGTTTGCTCTCACAATTTGGGAAAATGCTTGGAAGGCCTTGGATGCTCTTGGCATTGGAGACATACTCCGCCACCAACACCAACACCTTTATGGGAATGTCACTACTTCTTTGATCACGGGGCAACAGACATCCACTACCTCTTTCACTGACAACGGAAAACGTGGAGACACTGAAGTTCGTTGTGTTAGAAGGCAATTAATGTTGGAAGCCCTTGCCAATGAGCTTCCAAGTGGCACCATTAGGTACTTGTCAAAGGTTGTTGCTATTGAGGAATCAGGCTTCTTTAAGATACTCCATCTTGCTGATGGAACAACCATCAAAACAAAGGTGTTGATTGGGTGTGATGGAATAAACTCTGTGGTGGCAAAGTGGCTAGGCTTCAAAGAGGCCTCTTTTACTGGGAGATATGCAACCGGGGGTTATACAAAGTTAAAGAGAAATCATGGATTGGAGCCTATATTCATGCAGTTCTTTGGTAAAGGTTTTCGAGCTGGAGCTATTCCTTGTGATGAGAAGGCCGTTTACTGGTTTTTCACTTGGACTCCCACCAACCAAGACAAAGAGGTAGAAGAGAACCCTGCTAAACTGAAACAATTTGTGTTAAACAAGATGCCAAGTGATGTTAGATCCTTCATAGAAAAATCTGAATTAAATGGTTTCCGATCAGTTCCATTGAGATATAGACAACCATGGGAGCTCATGTGGGGAAATATAAGTAAAGGCAATGTTTGTGTTGTTGGTGATGCTTTACACCCAATGACACCTGACCTTGGCCAGGGAGGGTGTTGTGCTTTGGAAGATGGGGTTGTTTTAGCCAGGTGCCTAGCTGAGGCCTTCTCAAAAAATCCAGAAAGACATAATAACAAAGAGAAGGAAGAAGAGGAGCAATGCAAGAAGATTGAGCAATGCTTGAAGAAATATGCAAAGGAGAGAAGATGGAGAAGCATTGATGTCATTAGTACAGCTTATATGTTGGGTTCTATTCAGCAGGGACATTCAAAATTGGTTACCTTTTTCAGGGACAAATATTTGGCTCCACTCCTAGCTGATCAGCTTTTGAAGAAGTCAAATTTTGATTGTGGGAAACTAAATGGCTCTAAGTGA 1248 0.4263 METKQVTIVEDIVIVGAGIAGLTSSLGLHRLGVRSLVLESSDSLRVTGFALTIWENAWKALDALGIGDILRHQHQHLYGNVTTSLITGQQTSTTSFTDNGKRGDTEVRCVRRQLMLEALANELPSGTIRYLSKVVAIEESGFFKILHLADGTTIKTKVLIGCDGINSVVAKWLGFKEASFTGRYATGGYTKLKRNHGLEPIFMQFFGKGFRAGAIPCDEKAVYWFFTWTPTNQDKEVEENPAKLKQFVLNKMPSDVRSFIEKSELNGFRSVPLRYRQPWELMWGNISKGNVCVVGDALHPMTPDLGQGGCCALEDGVVLARCLAEAFSKNPERHNNKEKEEEEQCKKIEQCLKKYAKERRWRSIDVISTAYMLGSIQQGHSKLVTFFRDKYLAPLLADQLLKKSNFDCGKLNGSK. 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08002 415 Coils Coil 338 358 - -
Seca8g08002 415 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 - -
Seca8g08002 415 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 - -
Seca8g08002 415 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 - -
Seca8g08002 415 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 - -
Seca8g08002 415 Pfam FAD binding domain 11 328 IPR002938 GO:0071949
Seca8g08002 415 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 10 412 IPR044560 -
Seca8g08002 415 Gene3D - 11 392 IPR036188 -
Seca8g08002 415 SUPERFAMILY FAD/NAD(P)-binding domain 11 397 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08002 Seca-Chr8 177612892 177617964 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08002 10 412 Miscellaneous Gene Families AT5G05320 51.724 1.31e-148 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08002 - - gmx:100790765 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08002 8 177612892 177617964 Seca8g08002 8 177612892 177617964 ECH