Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07998 ATGGAAAGTGCAGCACTGCAGGTTGAAGACATTGTGATTGTGGGAGCTGGAATTGCTGGCCTCACAACATCCTTAGCACTTCACAGGGTGGGTGTCCGAAGTTTGGTATTAGAATGTGCAGATAGTTTAAGGGTGACAGGGTATGCTTTAACAACATGGACAAATGCTTGGAAAGCCTTGGATGCTGTTGGCGTCGGACCCATCCTTCGCCGCCAACATGTGCAGCTAAATGAGAATGTCACTACTTCTTTGATTTTGGAGAAAAAAACATCAAGCTTGTCATTCAAGGGCACCGGCAAACATGGGGACTGTGAAGTTCGTTGTGTTAGAAGGCAGTCAATGGTGGAAGCCCTTGCTAATGAACTTCCAAATGGCACCATCAGATATTTGTCAAAGATTATTGCTATTGAGGAATCAGCCTTATCTAAGATAGTCCATCTTTCTGATGGAACAAGCATCAAAACCAAGGTATTGATTGGGTGTGATGGAATAAACTCTGTGGTGGCAAAGTGGCTAGGCTTCAAGGAGGCCTCTTTTATTGGGAGATATGTAGTAAGGGGTTTCTCAACATTAAAGACCAACCATGGGCTCGCGCCCAAATTCATGCACTTTTTTGGGAAAGGTTTTCGATCTGGTGTACTTCCTTGTGATGACAACACCATTTACTGGTTTTTAACCTGGACTCCCACCATCCAAGACAAGGAGCTAGCAAAGAGCCCAGCTATGATGAAACAACTTGTGTTGAGGAAGCTTGAGAAGATGCCAAGTAATATTAAATCCTTAATAGAAAAGACTAAAGTAGAAGATATTTTAACATCTCCATTGAGATATAGACATCCCCATGAGCTTATGTTAGGAAATATCAGTAAAGGTAATGTTTGTGTTGTTGGAGATGCCTTTCACCCCATGGCCCCTGACCTTGGCCAAGGTGGGTGTTGTGCCTTAGAGGACGGGGTTGTTTTAGCAAGGTGTCTAGGTGAGGTATTCTCCAAAAAAACAGGGAGAGACATCAATGAAGAAGATAAGGAACTATATAAAAGGATTAAAGCTGGGTTGAGGAAATATGCAAAGGAGAGAAGATGGAGAAGCATTGATATAAGTGTTACATCATATATATTGGGTTTTATTCTGCAGGGTGATTTGGAATTGGTTGCCCATTTAAGGGACAAAGTTTTGGCTGCATTCTTAGCGGATATGCTTTTGAAGAAATCAGATTTTGATTGTGGAAAACAGCTCTGA 1239 0.4213 MESAALQVEDIVIVGAGIAGLTTSLALHRVGVRSLVLECADSLRVTGYALTTWTNAWKALDAVGVGPILRRQHVQLNENVTTSLILEKKTSSLSFKGTGKHGDCEVRCVRRQSMVEALANELPNGTIRYLSKIIAIEESALSKIVHLSDGTSIKTKVLIGCDGINSVVAKWLGFKEASFIGRYVVRGFSTLKTNHGLAPKFMHFFGKGFRSGVLPCDDNTIYWFLTWTPTIQDKELAKSPAMMKQLVLRKLEKMPSNIKSLIEKTKVEDILTSPLRYRHPHELMLGNISKGNVCVVGDAFHPMAPDLGQGGCCALEDGVVLARCLGEVFSKKTGRDINEEDKELYKRIKAGLRKYAKERRWRSIDISVTSYILGFILQGDLELVAHLRDKVLAAFLADMLLKKSDFDCGKQL. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07998 412 Pfam FAD binding domain 10 336 IPR002938 GO:0071949
Seca8g07998 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 - -
Seca8g07998 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 - -
Seca8g07998 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 - -
Seca8g07998 412 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 - -
Seca8g07998 412 Gene3D - 10 390 IPR036188 -
Seca8g07998 412 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 9 410 IPR044560 -
Seca8g07998 412 SUPERFAMILY FAD/NAD(P)-binding domain 10 402 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07998 Seca-Chr8 177572661 177577721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07998 1 410 Miscellaneous Gene Families AT5G05320 48.780 7.95e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07998 - - gmx:100799862 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07998 8 177572661 177577721 Seca8g07998 8 177572661 177577721 ECH