Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07996 ATGGATGGTGCAAATTATTTCAAAAATTGTACCTTCCTACTGGCAATTCTTACTTTTCTCTGTAGTTTTCTATTGAACCATGTCATGGCTAGTGTTTATATTGTTGGTGACGAGGAAGAATGGAGTAGCCAGACAAATTATGCTTCATGGGCAGAAGGGTACAATTTTAGCCTCGGGGATGTTCTTGTTTTCAGGTACCTGAAAGGGCAACATAATGTGTATGAAGTAACAGAGGAGACTTTCCGATCGTGTGATGCAAGTAGTGGAGTGTTGGCTAAGTATGAGAGTGGAGAAGATCAAGTGGTACTCAATGAGGTGAAGAGATATTGGTTCATTTGCAACATAGCAGGGCACTGCCTTGGGGGCATGAGGTTTGGAATTGAAGCCAAAGATGGCAACAATGTTACCCCTGCTTCTAATTCTGCGGATGAACCAATTCCCTCGTATAGTTCTTGTATGAGTTATATCTCTCAAAGATGGAGAGTGATTGGGAATTTTCTTCCTTTCGGATTGTTATTGTTCAACTAG 528 0.411 MDGANYFKNCTFLLAILTFLCSFLLNHVMASVYIVGDEEEWSSQTNYASWAEGYNFSLGDVLVFRYLKGQHNVYEVTEETFRSCDASSGVLAKYESGEDQVVLNEVKRYWFICNIAGHCLGGMRFGIEAKDGNNVTPASNSADEPIPSYSSCMSYISQRWRVIGNFLPFGLLLFN. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07996 175 CDD Phytocyanin 32 129 - -
Seca8g07996 175 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Seca8g07996 175 SUPERFAMILY Cupredoxins 30 128 IPR008972 -
Seca8g07996 175 PANTHER BLUE COPPER PROTEIN 29 129 IPR039391 GO:0009055
Seca8g07996 175 Gene3D - 29 135 IPR008972 -
Seca8g07996 175 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055
Seca8g07996 175 FunFam Blue copper binding protein-like 29 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07996 Seca-Chr8 177557657 177558661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07996 7 147 Miscellaneous Gene Families AT2G31050 35.664 3.25e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07996 - - gmx:100788784 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07996 8 177557657 177558661 Seca8g07996 8 177557657 177558661 ECH