Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07905 ATGGGTAGTGGCGAGCCCGTGATGGATGATCGCGTCATTAAATACCCTCTTTCCGCCATAGCGGAAGCCTTTGAAGAGCTTTCCAAAACAGTGAAGGAAAAGAAGGATGGTCAAGAACTTCGCTTAGACACCTTCTGTGAGGCTGCTTCTCTCGTCTCTGTTCTCTTCCGTTGTCTTGGCCTTGCCTTCAAATTTGCTGAATTGGAATACGTCGCTAAGCTACATGGACTACTGGAAGCATCAAAGACATGTCACACTCTACCGGAGATACTCAACCTTGATGTTGCCAGTGACTCAGTGAAGACATCAGGAAGCTGTTCACGTAATCTGCGCAGAGTTCGGCAGGGTCTTGATCTCGTCAGAGCTATATTTGAACTACTTTTGGCAACTGACGATAGTTCTCTAAAAGAGGTGGCTACAACAGCTTATGGACAGGTTTGTGCACCATATCACACATGGACAGTAAGAACAGCTGTATATGCTGGGATGTATACACTTCCAACAAGAGACCAACTTTTGGTGAAGCTCAATGAAACAGAGCAATCAGCTGAAAAGAAGATGAGAAGATACATTAATGCCTCACTTCCAATTATAGAATACATTGATAAAATGTACCTTTCTCGAAATATTACATTGGACTGGTGA 645 0.4372 MGSGEPVMDDRVIKYPLSAIAEAFEELSKTVKEKKDGQELRLDTFCEAASLVSVLFRCLGLAFKFAELEYVAKLHGLLEASKTCHTLPEILNLDVASDSVKTSGSCSRNLRRVRQGLDLVRAIFELLLATDDSSLKEVATTAYGQVCAPYHTWTVRTAVYAGMYTLPTRDQLLVKLNETEQSAEKKMRRYINASLPIIEYIDKMYLSRNITLDW. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07905 214 Coils Coil 169 193 - -
Seca8g07905 214 Pfam Glycolipid transfer protein (GLTP) 42 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Seca8g07905 214 Gene3D Glycolipid transfer protein 7 214 IPR036497 -
Seca8g07905 214 FunFam Accelerated cell death 11 8 214 - -
Seca8g07905 214 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 16 204 IPR014830 GO:0005737|GO:0120009|GO:0120013
Seca8g07905 214 SUPERFAMILY Glycolipid transfer protein, GLTP 32 213 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07905 Seca-Chr8 176718169 176721979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07905 13 214 Acyl Lipid Metabolism Gene Families AT4G39670 67.961 2.69e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07905 - - gmx:100818548 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07905 8 176718169 176721979 Seca8g07905 8 176718169 176721979 ECH