Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07899 ATGGTTTCTCTTAACTCATTAGCTGCTCTGAGTCTCTCTTTCCTTCTTCTAACTTTGCTTCTATGTGTAGCTGAAGGAGGTAGCTTTTCTTCCCCAAAGGCCACTAAAATTGGTCAGGGCTACCGTCTGATATCTATTGAAGACACCCCTGATGGTGCCCTTGTGGGGCTCCTCCAAGTTAAGCAAAGGAACAATATTTATGGTCCAGACATTCCCCTTTTACGCTTCTATGTCAAGCACGAGACTGAGAATCGTTTGAGGGTACATATAACTGATGCCAAGAACCAAAGGTGGGAGGTTCCTTACAATCTTTTGCCAAGGGAACAACCACCCCCTCTGAAGCAGAACATTAAGAGGTCAAGGAAGAACTCCATATTAGTGTTAGAGTCAGAGTACTCTGGCTCTGAGCTTGTTTTCAGTTACACTTCAGACCCCTTTAGCTTTGCAGTCAAAAGGAAGTCCAATGGAGATACCCTTTTTGACTCCAGCTCCAATGAATCAGACCCATTTGGTCCATTGGTCTTCAAGGACCAGTACCTGGAAATTTCTACCAAATTGCCCAAAGATGCTTCTTTGTATGGTTTGGGAGAGAACACGCAGCCTAACGGGATTAAACTGTATCCAAATGACCCTTATACTTTGTATACCACTGATATATCAGCAATTAATCTAAATGCTGATTTATATGGGTCACACCCTGTATACATGGATCACAGAAATAAAGGTGGGAAACCATATACACATGGTGTTCTGTTGCTGAATAGCAATGGAATGGATGTGTTCTACAAAGGGACCTCTCTGACATACAAAATCATTGGAGGTGTACTTGACTTTTACTTCTTTGCTGGGCCCACACCTCTGAATGTTGTGGATCAGTATACTTCTTTTATTGGCAGACCAGCTCCAATGCCTTACTGGGCTTTCGGATTCCACCAATGCAGATGGGGTTATCACAACCTATCTGTTGTAGAAGATGTTGTCGAGAATTACAACAAGGCTAAAATCCCACTTGATGTGATCTGGAATGATGATGATCACATGGATGGGCACAAGGACTTCACACTCAATCCAATTAACTACCCTCGTCCTAAGCTTTTGAACTTTCTGGACAAAATCCACAACATTGGCATGAAATACATTGTCATCATTGATCCTGGTATTGCTGTTAACTCCAGTTATGGTGTATACCAAAGGGGCATGGCTAATGATGTTTTTATCAAGTATGAAGGTGAACCCTTTTTGGCTCAAGTTTGGCCAGGAGCAGTAAACTTTCCTGATTTTCTCAATCCAAAAACAGTTTCTTGGTGGGGTGATGAAATCCGCCGCTTCCATGAACTTGTCCCTGTTGATGGCCTATGGATTGACATGAATGAAGTTTCAAATTTCTGCTCTGGAAAGTGCAAAATTCCAGAGGGAAGGTTGTGCCCCATTCCGAGTGCAAAAGGGCCCAATTCAACATGTTGCTTAGATTGCAAAAACATCACAGGCACAAGATGGGATGATCCTCCCTACAAAATCAATGCTTCAGGGGTACAGGCTCCTATAGGCTTCAAAACTATAGCCACTAGTGCAGTTCACTACAATGGTGTCTTGGAATATGATGCTCACAGCATTTTTGGTTTCTCTCAAGCCATTGCAACTCACAAGGCCCTTCTAGGACTTCAAGGAAAACGCCCTTTTGTTTTGTCTCGTTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATAAAGGCACATGGGAGGATTTGAGGTACTCAATAACTACAGTGCTCAATTTTGGAATATTTGGCATGCCAATGGTTGGTTCAGATATATGTGGTTTCTATCCAGCACCCACTGAAGAGCTTTGTAATCGGTGGATTGAAGTTGGTGCTTTTTATCCTTTCTCAAGGGATCATTCAAGCTATGGCTCCCCAAGACAGGAACTTTACCAATGGGAGTCAGTGGCTGAGTCTGCTAGAAATGCTTTGGGTATGAGGTATAAGCTTCTCCCATATTTGTACACTCTGAACTATGAGGCTCATATTAGTGGAGCCCCAATTGCAAGGCCACTTTTCTTCTCATTTCCAACTTACACTGAATGCTATGGCCTCAGCACCCAGTTCTTGCTTGGGAGCAGCCTAATGATTTCCCCTGTGCTTGAGAAAGGAAAAACACAAGTTAAAGCACTCTTTCCTCCTGGAACATGGTACAGTTTGTTTGATTTGACACAGGCCATTGTTTCAAAAGATAGAACCTATGTTACCCTTGATGCACCTTTACATGTAATCAATGTGCATTTGTATCAGAACACCATTCTTCCAATGCAACAGGGTGGAATGGTATCTAAGGATGCTAGAATGACACCGTTCACCCTCATTGTGACCTTCCCAGCAGGTGCAAATGAAGGAGAAGCTAAAGGGAACCTATTCCTTGATGATGATGAGCTCCCAGAAATGAAGCTTGGAAATGGCTATTCAACCTTCATTGATTTCTATGCTACAGTCAAAGAAGGAAGTGTGAAAGTATGGTCAGAAGTCCAAGAGGGAAAATTTGCTTTAGATAAAGGTTTGGTTATTGATACCATAAATGTGTTGGGATTGAGTGGAAGTGGAGCAGTAGCTACAATTGAGATAGATGGAAAACCAGCAATGGGTGTCTCAAATGTGGAAGTTAGTGTATCTGAACATAAGTACTTGTACGAGCAGGGAGATGGAGAAAATACAATAGTGATAGTGGGATTGGAAGGGTTGAATATCCCTGTAGGGAAGAACTTTGCTATGAGCTGGAAGATGGGATCATAA 2799 0.4255 MVSLNSLAALSLSFLLLTLLLCVAEGGSFSSPKATKIGQGYRLISIEDTPDGALVGLLQVKQRNNIYGPDIPLLRFYVKHETENRLRVHITDAKNQRWEVPYNLLPREQPPPLKQNIKRSRKNSILVLESEYSGSELVFSYTSDPFSFAVKRKSNGDTLFDSSSNESDPFGPLVFKDQYLEISTKLPKDASLYGLGENTQPNGIKLYPNDPYTLYTTDISAINLNADLYGSHPVYMDHRNKGGKPYTHGVLLLNSNGMDVFYKGTSLTYKIIGGVLDFYFFAGPTPLNVVDQYTSFIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVENYNKAKIPLDVIWNDDDHMDGHKDFTLNPINYPRPKLLNFLDKIHNIGMKYIVIIDPGIAVNSSYGVYQRGMANDVFIKYEGEPFLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEVSNFCSGKCKIPEGRLCPIPSAKGPNSTCCLDCKNITGTRWDDPPYKINASGVQAPIGFKTIATSAVHYNGVLEYDAHSIFGFSQAIATHKALLGLQGKRPFVLSRSTYVGSGKYAAHWTGDNKGTWEDLRYSITTVLNFGIFGMPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHSSYGSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPTYTECYGLSTQFLLGSSLMISPVLEKGKTQVKALFPPGTWYSLFDLTQAIVSKDRTYVTLDAPLHVINVHLYQNTILPMQQGGMVSKDARMTPFTLIVTFPAGANEGEAKGNLFLDDDELPEMKLGNGYSTFIDFYATVKEGSVKVWSEVQEGKFALDKGLVIDTINVLGLSGSGAVATIEIDGKPAMGVSNVEVSVSEHKYLYEQGDGENTIVIVGLEGLNIPVGKNFAMSWKMGS. 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07899 932 Gene3D glycosyl hydrolase (family 31) 34 299 - -
Seca8g07899 932 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 57 188 IPR031727 -
Seca8g07899 932 CDD GH31_N 180 298 - -
Seca8g07899 932 FunFam Alpha-glucosidase 1 668 768 - -
Seca8g07899 932 Gene3D Glycosidases 300 667 - -
Seca8g07899 932 Gene3D - 770 932 IPR013780 -
Seca8g07899 932 SUPERFAMILY Galactose mutarotase-like 36 286 IPR011013 GO:0003824|GO:0005975|GO:0030246
Seca8g07899 932 SUPERFAMILY Glycosyl hydrolase domain 685 766 - -
Seca8g07899 932 CDD GH31_MGAM_SI_GAA 298 680 - -
Seca8g07899 932 PANTHER ALPHA-GLUCOSIDASE 50 885 - -
Seca8g07899 932 FunFam Maltase-glucoamylase, intestinal 300 667 - -
Seca8g07899 932 Pfam Glycosyl hydrolases family 31 279 772 IPR000322 GO:0004553|GO:0005975
Seca8g07899 932 Pfam Galactose mutarotase-like 190 258 IPR025887 -
Seca8g07899 932 SUPERFAMILY (Trans)glycosidases 289 683 IPR017853 -
Seca8g07899 932 ProSitePatterns Glycosyl hydrolases family 31 active site. 451 458 IPR030458 -
Seca8g07899 932 FunFam Alpha-glucosidase 1 34 299 - -
Seca8g07899 932 Gene3D - 668 767 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07899 Seca-Chr8 176613162 176616632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07899 29 931 Glycoside Hydrolase AT1G68560 74.254 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07899 K15925 - gmx:100816950 1625.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07899 8 176613162 176616632 Seca8g07899 8 176613162 176616632 ECH