Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07830 ATGCATAGGGAGAAAAGTAGATCGATGATGGATGAAACCGAAGAACTCGAGCCCTTGTTTGATTACAGTCGCGTTCAGCCCTTCAATTTCGTGTGCCTTGACGATGATGCAGATGATGAACATGTCACTAGCGTTAATAACAAGAGGAAGGCTTCACAGCTTGCTGAGAATGTAAAGAATCCAGTGAAAGCAGTACCGGTGGTGGACATTGAGGACAAGGATGATGATTGGTTACCTCCTCCACCGAAGGCTCCAAGTAATGCCCAGAGACAGAGGACGATTGATGAGGATTCAACTCTGAAGAAGTTGAGATTAAAGAAGCAGGAGCTTGTCTCTTTTGCTGAATCAGCAAAAAATTTGTTAAAAACTGTTGAGGAGTCTGCAAAATTGGAGATCTGTAATTCATTGCAGTCTTCCAAGGATGGTGTGAGCGAAAAAACTTCAGAACCTTCTGAAAGAGCCAAGATTGTCATCTCTGTTCAAGACAAGGATGAAACTAAGCAGATCCGTATGTTCATGGATGACAAGTTTGAAAGGATTGTCAAAACTTATGCAGAGAAACTAAGGTGCGACATGAAGCAGATTGTACTGTCCTTTGATGGTGATAAAATAAGTTTGTCTGAAACCCCTGCTAGTCTTGGGATGGAAGACAATGATATGATTGAAGTTCATGTGAAATCAAGGTGA 687 0.4178 MHREKSRSMMDETEELEPLFDYSRVQPFNFVCLDDDADDEHVTSVNNKRKASQLAENVKNPVKAVPVVDIEDKDDDWLPPPPKAPSNAQRQRTIDEDSTLKKLRLKKQELVSFAESAKNLLKTVEESAKLEICNSLQSSKDGVSEKTSEPSERAKIVISVQDKDETKQIRMFMDDKFERIVKTYAEKLRCDMKQIVLSFDGDKISLSETPASLGMEDNDMIEVHVKSR. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07830 228 Pfam Ubiquitin-2 like Rad60 SUMO-like 155 224 IPR022617 -
Seca8g07830 228 Gene3D - 138 227 - -
Seca8g07830 228 SUPERFAMILY Ubiquitin-like 147 226 IPR029071 -
Seca8g07830 228 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 9 227 - -
Seca8g07830 228 MobiDBLite consensus disorder prediction 70 96 - -
Seca8g07830 228 ProSiteProfiles Ubiquitin domain profile. 154 228 IPR000626 GO:0005515
Seca8g07830 228 CDD Ubl_SUMO_like 155 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07830 Seca-Chr8 175714829 175718014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07830 - - aprc:113871079 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07830 8 175714829 175718014 Seca8g07830 8 175714829 175718014 ECH