Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07819 ATGCCGGCTAGTTTGCTCTGCTGTTGTTTGGGAATGTCTGAGAGTAGCTTCTTCAGCACACTAAACATGGAGTCCAATGGTCATAGAAGAGCAAAGAGGCATGATTGTGTAGTTAAAGAAAATGGTGATTCCCATTTCTCAAATCTTGATGATGAACATGATCCATGGACTGCATGGGCATACAAGCCTCGCACAATCACGTTGTTACTTATTGGTGCTGGCTTTCTTATTTGGGCAAGTGGAGCACTTGATCCAGAAAGAGATGCATCCGGTGATGTTGTTACTTCTGTTAAAAGGGGTGTATGGGCAATGATTGCTGTTTTTCTTGCTTATTGTTTGCTGCAAGCTCCTTCTACGGTTCTTATTAGACCACATCCTGCAATTTGGCGCTTGGTTCATGGGATGGCTGTTGTTTACCTGGTTGCCCTCACATTTTTGCTTTTTCAGAAACGTGATGATGCTCGACAGTTTATGAAGTATCTTCATCCTGATCTTGGTGTTGAACTTCCGGAAAGATCTTATGGTGCTGATTGTCGCATATATCTGCCTGAAAACCCGGCAAGCAGGTTTAAGAATGTTTATGAGACACTTTTTGATGAGTTTGTTCTAGCTCATATTATTGGGTGGTGGGGAAAGGCAATATTGATTCGTAATCAGCCCCTTCTTTGGGTGTTATCAATTGGCTTTGAGTTGATGGAGCTTACTTTTCGTCACATGTTGCCAAATTTCAACGAGTGCTGGTGGGACAGTATAATTCTTGACATCCTGATCTGCAATTGGTTTGGAATTTGGGCAGGAATGCATACTGTTAGATACTTTGATGGGAAAACATACAAGTGGGTTGGGCTAAGCCGCCAGCCTAATATAATAGGAAAAGTGAAACGAACATTAGGCCAATTCACACCGGCTCAGTGGGACAAAGATGAGTGGCATCCATTGCTTGGTCCATGGCGTTTTATTCAAGTCCTTAGTCTTTGCATTGTATTTTTGACAGTAGAGCTCAACACATTCTTTTTGAAGTTTTGTCTGTGGATACCTCCTCGAAATTCAGTTGTTATATATAGGTTGATTTTGTGGTGGCTACTTGCAATTCCAACAATTCGAGAGTACAATTCATACCTTCAAGACAGAAAGCCAGTGAAAAAGGTTGGAGCATATTGTTGGCTCTCTCTTGCCATTTGCATTGTGGAACTTCTAATTTGCATAAAGTTTGGACATGGCTTGTATCCTAAACCAATGCCTTTGTGGCTGGTAATATTGTGGTCATCTGTTGGAGTGGCAATTTTTTCATTTTTGATTTTGTGGTCTTGGCAACTCCACCGGAGTCTAGGGAAAAAGAGGCAATAA 1347 0.4157 MPASLLCCCLGMSESSFFSTLNMESNGHRRAKRHDCVVKENGDSHFSNLDDEHDPWTAWAYKPRTITLLLIGAGFLIWASGALDPERDASGDVVTSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMAVVYLVALTFLLFQKRDDARQFMKYLHPDLGVELPERSYGADCRIYLPENPASRFKNVYETLFDEFVLAHIIGWWGKAILIRNQPLLWVLSIGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYKWVGLSRQPNIIGKVKRTLGQFTPAQWDKDEWHPLLGPWRFIQVLSLCIVFLTVELNTFFLKFCLWIPPRNSVVIYRLILWWLLAIPTIREYNSYLQDRKPVKKVGAYCWLSLAICIVELLICIKFGHGLYPKPMPLWLVILWSSVGVAIFSFLILWSWQLHRSLGKKRQ. 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07819 448 Pfam Phosphatidyl serine synthase 124 404 IPR004277 GO:0006659|GO:0106245
Seca8g07819 448 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 52 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07819 Seca-Chr8 175516387 175522540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07819 23 448 Acyl Lipid Metabolism Gene Families AT1G15110 79.391 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07819 K08730 - gmx:100787048 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07819 8 175516387 175522540 Seca8g07819 8 175516387 175522540 ECH