Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07802 ATGTCACTCTTACTTTCACCACCACACCCCCATGCGCACTTTAGCCCCTCTCCCTTTCCCATGTCCATCCTACGCCGCCTCAATCTAAACCTCCGCAACCATCACCGCCGCCGCCGCATCGCCACCGTTTCCGCCGCCGTTCGCCAGGAAACCGCCGCCTGGACTCAAGCCCCGCTCTCCGAGGTCGAGCCCGCCGCCGAATCCCTCTTCCACGTGACCATCGACGTGTCCGACGCGCCCGACCTGGTCGCTTCCCACACACGCGCCGGTCAGTACCTGCAGCTCCGAGTCCCCGACGCGCCTAAGCCGTCGTTTCTGGCCATCGCGTCGCCGCCGAAGCTTTCTTCGTCGCGTGGCGTGTTCGAGTTTCTGGTGAAGAGCGTGGCGGGGTCCACCGCCGAAGCGTTATGCGCGTTGAAGAGAGGGGATGTGGTTGAGCTCAGCCAGGTTATGGGAAACGGGTTCGATATCAGCCGGATCAGCCCGCCCGAGAAATTTGGAACCGTTCTCGTGTTTGCCACTGGATCCGGAATTAGTCCGATTCGGTCGCTTATTGAGTCGGGATTTGATGCTGGCAAGAGGTCTGATGTGAGACTATATTATGGGGCCAGAAATCTTCAGAGAATGGCTTATCAGGATAGATTTAAAGACTGGGAATCTTCTGGTGTGAAGATTGTGCCTGTGTTGTCTCAACCAGATGATAGTTGGACTGGAGAAAGTGGCTATGTACAGGTAAAGTGTGTCAGCATGTAG 753 0.5724 MSLLLSPPHPHAHFSPSPFPMSILRRLNLNLRNHHRRRRIATVSAAVRQETAAWTQAPLSEVEPAAESLFHVTIDVSDAPDLVASHTRAGQYLQLRVPDAPKPSFLAIASPPKLSSSRGVFEFLVKSVAGSTAEALCALKRGDVVELSQVMGNGFDISRISPPEKFGTVLVFATGSGISPIRSLIESGFDAGKRSDVRLYYGARNLQRMAYQDRFKDWESSGVKIVPVLSQPDDSWTGESGYVQVKCVSM. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07802 250 PANTHER - 9 244 - -
Seca8g07802 250 PRINTS Phenol hydroxylase reductase family signature 87 99 - -
Seca8g07802 250 PRINTS Phenol hydroxylase reductase family signature 195 204 - -
Seca8g07802 250 PRINTS Phenol hydroxylase reductase family signature 170 189 - -
Seca8g07802 250 Gene3D Translation factors 46 152 - -
Seca8g07802 250 CDD FNR_like 60 239 - -
Seca8g07802 250 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 163 244 IPR039261 -
Seca8g07802 250 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 52 157 IPR017927 GO:0016491
Seca8g07802 250 SUPERFAMILY Riboflavin synthase domain-like 54 154 IPR017938 -
Seca8g07802 250 Gene3D - 166 249 IPR039261 -
Seca8g07802 250 Pfam Oxidoreductase NAD-binding domain 173 247 IPR001433 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07802 Seca-Chr8 175308528 175312047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07802 - - lang:109346377 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07802 8 175308528 175312047 Seca8g07802 8 175308528 175312047 ECH