Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07771 ATGGGTGCTCTTGATTTCCTTTCAGATTACTTCTCAGTTTCCACCCCAAAAAAGAAACGCAAACCAATGCAGACAGTTGAAATCAAGGTGAAAATGGACTGTGAAGGCTGTGAAAGAAGAGTTCGGAATTCTGTTTCTAACATGAAAGGTGTGAAGGAAGTGGATGTGAATAGAAAGCAAAGCAAGGTAACTGTGACAGGTTACGTGGATAGAAACAAGGTCTTAAAGAAAGTGCAGAGCACAGGAAAGAGAGCGGAGTTTTGGCCATATGTTCAATACAACTTGGTGGCATATCCGTATGTGGCACAGGCATATGACAAGAAGGCACCCTCTGGGTATGTCAAAATTACTGAACAAGCACTCCCCAATCCAAATGCACCAGATGAGAAACTCACCTCCCTCTTCAGTGATGATAATCCTAATGCATGTTCAATCATGTGA 441 0.424 MGALDFLSDYFSVSTPKKKRKPMQTVEIKVKMDCEGCERRVRNSVSNMKGVKEVDVNRKQSKVTVTGYVDRNKVLKKVQSTGKRAEFWPYVQYNLVAYPYVAQAYDKKAPSGYVKITEQALPNPNAPDEKLTSLFSDDNPNACSIM. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07771 146 FunFam Heavy metal-associated isoprenylated plant protein 26 11 88 - -
Seca8g07771 146 Gene3D - 10 89 - -
Seca8g07771 146 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Seca8g07771 146 SUPERFAMILY HMA, heavy metal-associated domain 22 89 IPR036163 GO:0046872
Seca8g07771 146 ProSiteProfiles Heavy-metal-associated domain profile. 23 86 IPR006121 GO:0046872
Seca8g07771 146 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 25 144 IPR045181 GO:0046872
Seca8g07771 146 CDD HMA 27 86 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07771 Seca-Chr8 174988984 174989738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07771 - - gmx:100785059 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07771 8 174988984 174989738 Seca8g07771 8 174988984 174989738 ECH