Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07760 ATGGGCAAGACAAGTTCAAGGTCTGATTCAAAATCCAACCCCAAGTTCGAGAAGAAGTTACAATTTTATTCCAAGGTGAAAGATGCCGTTGCTTCCTTGAGTGCCCAAAAGTCTATTACTAAGAAGAAGAGCAAACAACAAAGGCGGCAGAACAAATTGAAAGCATATAACCTCTCCTCACTCTTAGAGTCCCTTCCAGAGTTGAAGGCATCACGGAAACCAGGTGGTGAAGATGACTTCAAACTTAATTGTAAATCTAGGCAGAAATTAATATTGAAGGAAGGACAACGGTTGTCTGCTGTTCTTAAGCATCATTTCTTCCAAGCAGATCCCCTGTCTGCCATCCATCAACACTTACAGCACACACAACCAGTAGTCGAGGAACAACCCAAGAAAAAAATGAACAAAAATGGATCCAAGAAAAAGAAGAAATCAAAGGCTTCAGCTGGACTACAGTCTATGGATATGTGA 471 0.4098 MGKTSSRSDSKSNPKFEKKLQFYSKVKDAVASLSAQKSITKKKSKQQRRQNKLKAYNLSSLLESLPELKASRKPGGEDDFKLNCKSRQKLILKEGQRLSAVLKHHFFQADPLSAIHQHLQHTQPVVEEQPKKKMNKNGSKKKKKSKASAGLQSMDM. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07760 156 PANTHER PROTEIN FAM207A 4 139 - -
Seca8g07760 156 MobiDBLite consensus disorder prediction 118 156 - -
Seca8g07760 156 Pfam Ribosome biogenesis protein SLX9 9 122 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07760 Seca-Chr8 174845808 174850079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07760 - - gmx:100527125 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07760 8 174845808 174850079 Seca8g07760 8 174845808 174850079 ECH