Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07757 ATGGTGATGGTGATGGCGATGGCAGTTGCTCAACCCTCCGCTTCTCTTTCTCTCTCTTTTCGTGATGCTTGTGTTTTCACCGCAACTAAATACCCTGCCTCCTCTGCTCGCTTTCCTCAATCTAGTTTGGTTCCCTCTCGAGCTTCCTTCGCCACTGGTTCCCCACTCTGTAAGACTTTCATTCTAGTTCCTCATTATTCTAATTACTTCTTATCAAAATTCCATTCAACTCTGCCACTCCATTCCATTTCTACCCTTCACTTGAAAATTCAATGCTTGGAATTGTTTGACTTGTCTCAAGTGATTCGAAGAAACCATGAAAGGAAACCTGTATGCAAAGCCATGGCTGTTTCAATAAGATGTGAGCAAAGTACCAAGGGCGGAAACGGTTTTGATGTATGGCTAGGCCGGCTAGCCATGGTTGGCTTTGCAGTAGCCATCAGTGTTGAAATTGCTACTGGAAAGGGACTTCTAGAGAACTTTGGAGTCGGAACTCCGCTGCCCACGGTTGCCCTTGCAGTAACAGCACTGGTGGGTGTCTTGACGGCAGTTTTTATCTTCCAGTCAGCCTCAAAGAACTAA 582 0.4588 MVMVMAMAVAQPSASLSLSFRDACVFTATKYPASSARFPQSSLVPSRASFATGSPLCKTFILVPHYSNYFLSKFHSTLPLHSISTLHLKIQCLELFDLSQVIRRNHERKPVCKAMAVSIRCEQSTKGGNGFDVWLGRLAMVGFAVAISVEIATGKGLLENFGVGTPLPTVALAVTALVGVLTAVFIFQSASKN. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07757 193 PANTHER STRESS ENHANCED PROTEIN 2, CHLOROPLASTIC 106 192 IPR044971 GO:0071486
Seca8g07757 193 SUPERFAMILY Chlorophyll a-b binding protein 130 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07757 Seca-Chr8 174838438 174840876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07757 - K07937 gmx:100306702 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07757 8 174838438 174840876 Seca8g07757 8 174838438 174840876 ECH