Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07727 ATGGAATTGGAAGTCGACGAAAACGACCTGAAAGCCGCCGGTGCAGAGCTGTTCGCCGACGGTGGCCGGAAAGGCGTTCGTATCCATGGCTGGATGATCGAGTCTCGGCGGCACTCCATACTAAACTCTTCAACCATCGAAGAGTGGGAACAGAAACTTCAGACGTCTCATTTACCAGAAATGGTTTTTGGGGAAAACGCTTTAATTCTAAAACATTTTAGTAGTGGCACCAAAATTCACTTTAATGCATTTGATGCTCTACGTGGCTGGAAACAGGAAGCCTTGCCGCCGGTTGAAGTTCCTGCAGCGGCTAAATGGAAGTTTAGAAGCAAGCCCTCTCAGCAAGTAATACTAGATTACGACTATACATTTACAACGCCTTACTGTGGAAGTGACACTATTGAGATTGATAAAGTTCTGGATGGGAGAGAGATTTCTGAGGAAACTGGAAATATCCATTGGGAAGACTGCAAGGAAGAGATTGATTTAGTTGCATTGGCGTCCAAAGAGCCTATACTTTTCTATGATGAGGTGGTATTATATGAGGATGAACTTGCTGATAATGGAGTTTCACTTCTTACTGTAAAAGTGAGAGTAATGCCAAGTTCTTGGTTTCTTCTCTTGCGATTCTGGCTTAGAGTTGATGGAGTGTTGATTCGACTGAGAGACACTCGAATGCACTGTATATTTGGTGAAAGCACAAATCCTGTTATACTTCGAGAGATTTGCTGGAGAGAATCTACATTTCAAGCTTTATCTGCTAAAGGGTATCCTTTTGATTCTGCTGCGTATAATGATCCGAGCATCATCAGCCAGAGGCTCCCCGTCGTCACGCATGTGACCCAAAAGCTTGTAATTTCCCCTTAA 867 0.4371 MELEVDENDLKAAGAELFADGGRKGVRIHGWMIESRRHSILNSSTIEEWEQKLQTSHLPEMVFGENALILKHFSSGTKIHFNAFDALRGWKQEALPPVEVPAAAKWKFRSKPSQQVILDYDYTFTTPYCGSDTIEIDKVLDGREISEETGNIHWEDCKEEIDLVALASKEPILFYDEVVLYEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRDTRMHCIFGESTNPVILREICWRESTFQALSAKGYPFDSAAYNDPSIISQRLPVVTHVTQKLVISP. 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07727 288 PANTHER GAF/PUTATIVE CYTOSKELETAL PROTEIN 23 284 - -
Seca8g07727 288 Pfam TIP41-like family 61 252 IPR007303 GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07727 Seca-Chr8 174538644 174542553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07727 K17607 - gmx:100811660 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07727 8 174538644 174542553 Seca8g07727 8 174538644 174542553 ECH