Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07708 ATGACCAGTGCTTATCTGAAGAACTCCACCACCATGGTTTCCCATATCATGATGCAGAGGCAATTGATGTTGACGAACCGTGTCATTCATCCAATTAGAATCCCTTCTTTGCTCTGCAACAAAGTGCAGTCCAAACCTTATTTTCGATTACCAGATTGCATGAGGAAAACCAGAGAATATGGAATATTCCCATCTTTGTTTACTTCATCATTTTGTTCTTCTTCTTCTTCCTCGTCTGCTACAACAGCCTCAGCCTCCATCTCCAAGGTTGGCTTTGTGGGTTGGTATTTGGGGATGGTCAAGTCACGGCCCATTCTCACAAAAAGTGTTACTTCTGCACTTATTTACACCGCTGCTGATTTATCCTCCCAGACTATTGCACGGCAATCTTCAGAACCTTTTGATTTTATAAGGACTTTACGCATGGCAGGATATGGGATGATCATCTTAGGACCATCACTGCATTTCTGGTTCAATTTTGTGTCAAAGCTTTTCCCAAGGAGGGATCTTTTCTCTACATTGAAGAAAATGGTCATGGGTCAGGCACTTTATGGACCTGCCATGACTGTTGTTTTCTTCTCCTTGAATGCACGTCTGCAGGGTGAGAACAACACAGAGATTGTTGCACGTTTAAAACGTGATTTGCTTCCTACGATGTTAAATGGAGTTATGTACTGGCCTGTGTGTGATTTTATTACCTTCAGATTCATTCCTGTTCATTTACAGGTATCCATTAGTGAGCAATTCATTTTCCTACTTGTGGACCATTTATATGACATATATGGCAAGCTTAGAGAAAGCAGAGACAGCTAG 813 0.4157 MTSAYLKNSTTMVSHIMMQRQLMLTNRVIHPIRIPSLLCNKVQSKPYFRLPDCMRKTREYGIFPSLFTSSFCSSSSSSSATTASASISKVGFVGWYLGMVKSRPILTKSVTSALIYTAADLSSQTIARQSSEPFDFIRTLRMAGYGMIILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQALYGPAMTVVFFSLNARLQGENNTEIVARLKRDLLPTMLNGVMYWPVCDFITFRFIPVHLQVSISEQFIFLLVDHLYDIYGKLRESRDS. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07708 270 Pfam Mpv17 / PMP22 family 199 245 IPR007248 GO:0016020
Seca8g07708 270 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 92 247 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07708 Seca-Chr8 174372442 174378266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07708 43 266 Miscellaneous Gene Families AT2G14860 58.482 1.52e-90 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07708 K13348 - gmx:100816797 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07708 8 174372442 174378266 Seca8g07708 8 174372442 174378266 ECH