Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07699 ATGGTGGTCTGCAAATGTCGCAAGGCTACTAAGCTATATTGCTTTGTGCACAAAGTTCCTGTATGCGGAGAATGTATCTGTTTCCCAGAGCACCAAATCTGCGTGGTCCGGACTTACTCAGAATGGGTTATAGATGGGGAATATGATTGGCCTCCTAATTGCTGTCAATGCCAAGCTGTTTTAGAAGAGGGGGGTGGATCTCAAACTACTCGACTGGGTTGCTTGCATGTTATCCATACAAATTGCTTGGTCTCACATATCAAGAGTTTTCCTCCACATACTGCCCCAGCAGGATATGTGTGTCCTTCATGTTCTACATCGATATGGCCTCCCAAAAGCGTGAAAGATTCAGGTTCTCGTCTTCATTCCAAGTTGAAGGAAGTTATCATGCAGACTGGTATGGAAAAGAATATATTTGGAAATCATCCAGTTTCATTGTCAGTGACAGAATCTCGGAGTCCTCCACCTGCTTTTGCTTCAGATCCATTGATTGGCAGGGAAAATCTTGGAAACTCAGACTCACCTGCAACTGGGTCAGAACCTTCTAAACTTTCAGTGACAGATATTGTGGAGATAGATGGTGCTAATTCGGCAGGAAATTTCATGAAAGGCTCAAGTCCTGCTGGTCCTGGTGCTACCACAAGGAAGGGCTCACTCCATGTTGAACGACAGAACTCTGAAATCTCATACTATGCTGATGATGAAGATGGCAATCGTAAAAAGTATACAAAAAGAGGCCCGTTCCACCATAAGTTTCTTAGAGCATTGCTTCCCTTCTGGTCTAGTGCTTTACCAACTCTACCAGTGACTGCACCTCCAAGGAAAGATGCATCAAATGGAGCCGAAACCTCAGAAGGCCGTACACGGCATCAAAGATCGTCAAGGATGGACCCCAGAAAAATTCTTCTCCTGATTGCAATTATGGCGTGCATGGCAACTATGGGTATATTGTATTACAGACTAGTGCAACGGGGTCCAGGGGAAGAGCCTCTCAATGATGAATAA 1005 0.4478 MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPNCCQCQAVLEEGGGSQTTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYVCPSCSTSIWPPKSVKDSGSRLHSKLKEVIMQTGMEKNIFGNHPVSLSVTESRSPPPAFASDPLIGRENLGNSDSPATGSEPSKLSVTDIVEIDGANSAGNFMKGSSPAGPGATTRKGSLHVERQNSEISYYADDEDGNRKKYTKRGPFHHKFLRALLPFWSSALPTLPVTAPPRKDASNGAETSEGRTRHQRSSRMDPRKILLLIAIMACMATMGILYYRLVQRGPGEEPLNDE. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07699 334 MobiDBLite consensus disorder prediction 145 183 - -
Seca8g07699 334 MobiDBLite consensus disorder prediction 280 295 - -
Seca8g07699 334 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 330 IPR039043 -
Seca8g07699 334 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
Seca8g07699 334 MobiDBLite consensus disorder prediction 269 295 - -
Seca8g07699 334 MobiDBLite consensus disorder prediction 197 232 - -
Seca8g07699 334 SUPERFAMILY RING/U-box 53 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07699 Seca-Chr8 174266131 174273586 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07699 - - gmx:100805734 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07699 8 174266131 174273586 Seca8g07699 8 174266131 174273586 ECH