Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07687 ATGAAGTGGTACAGTACAGAGAAAGTTCAAGGCCAGGAAAACTATACCATCTCAGATGCCATGCTGAAATTCACCAAAGAGAATGACATTTCTTTGAGAGGTCATAACATTTTCTGGGATGATCCAAAATATCAGCCTGAATGGGTTAAGTCCCTATCACCTGAGGATTTACAAAAAGCAGCAGATAAAAGGATAAATTCAGTGGTTTCAAGATATAAAGGAGAAGTGATTGCATGGGATGTGGTGAATGAGAATGTCCACTTCCACTTTTTTGAAGATAAACTTGGTGTGAATGCCTCTTCAGTGTATTATTCAACGGCTTACCAGCTTGATCCAAAAACAATCATGTTCCTGAATGAGTATAACACCATTGAATATAGTGGGGATGAGGCTGCCAGCCCAGCCCATTACCTCCAGAGACTTGGGGATATTCTGTCATTTCCAGGAACTTATGGAATATTACCAGCAATAGGGTTGCAAGGCCATTTTGGTTCTGGCCAGCCCAATATAGCTTACATGAGATCAGGTCTTGATCTTCTTGCTGAAACTAAATTTCCAATATGGATCACAGAAGCAAGTAATGATCCACACCCAAATCAGGCAGAGTACTTCGAAGATATACTAAGAGAGGCTTACTCTCATAGGGCTGTTGAAGGGATTATAATGTTTTCAGGTCCAGCACAAGCTGGTTTCAATAAGACGACCCTCGCAGATGAAAATTTCCGAAATACCCCAATTGGAGAAGTTGTGGACAAGCTGATTTATGAGTGGGGAACTGGGCCTCAAAAGGCCATAGCAGATAGCAGTGGAATTGTTGATATTTCATTGCATCATGGAGATTATGATGTAACTGTTACACATCCCCTAACCAACTTCTCCAAAACAATGAAACTGAGTGTGAGGAGAGGCTTTTCACAGGAAACCACCATCCGTGTGAAAATGCATGCCTGA 951 0.4143 MKWYSTEKVQGQENYTISDAMLKFTKENDISLRGHNIFWDDPKYQPEWVKSLSPEDLQKAADKRINSVVSRYKGEVIAWDVVNENVHFHFFEDKLGVNASSVYYSTAYQLDPKTIMFLNEYNTIEYSGDEAASPAHYLQRLGDILSFPGTYGILPAIGLQGHFGSGQPNIAYMRSGLDLLAETKFPIWITEASNDPHPNQAEYFEDILREAYSHRAVEGIIMFSGPAQAGFNKTTLADENFRNTPIGEVVDKLIYEWGTGPQKAIADSSGIVDISLHHGDYDVTVTHPLTNFSKTMKLSVRRGFSQETTIRVKMHA. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07687 316 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 1 253 IPR001000 GO:0004553|GO:0005975
Seca8g07687 316 Gene3D Glycosidases 1 258 - -
Seca8g07687 316 PANTHER GLYCOSYL HYDROLASE 1 301 IPR044846 GO:0004553|GO:0005975
Seca8g07687 316 SMART glyco_10 1 253 IPR001000 GO:0004553|GO:0005975
Seca8g07687 316 Pfam Glycosyl hydrolase family 10 1 192 IPR001000 GO:0004553|GO:0005975
Seca8g07687 316 SUPERFAMILY (Trans)glycosidases 1 260 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07687 Seca-Chr8 174156453 174160294 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07687 1 316 Glycoside Hydrolase AT4G33820 48.916 3.35e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07687 - - gsj:114403439 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07687 8 174156453 174160294 Seca8g07687 8 174156453 174160294 ECH