Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07685 ATGAACCGTTATATTCTCAAATTCCGTCACTACAGGAAATGGTTTTTGTCAAGATTCAAATACACAACTTTCACCAATGAGATGAAGTGGTACAGTACAGAGAAAGTTCAAGGCCAGGAAAACTATAGCATCCCAGATGCCATGCTGAAATTCACCAAAGAGAATTACATTTCTGTGAGAGGTCATAACATTTTCTGGGATGATCCAAAATATCAGCCTGAATGGGTTAAGTCCCTATCTCCTGAGGATTTACAAAAAGCAGCAGATAAAAGGATAAATTCAGTGGTTTCAAGATATAAAGGAGAAGTGATTGCATGGGATGTGGTGAATGAGAATGTCCACTTCCACTTTTTTGAAGATAAACTTGGTGTGAATGCCTCTTCAGTGTTTTATTCAACAGCTTATAAGCTTGATCCAAATACTACCATGTTCTTCAATGAGTATAACACCATTGAATATAGTGGAGATAAGGTAGCCAGCCCAGCCAATTACATCCAGAGAGTTAAGGAGATTCTGACATATCCAGGAACTGATGGAATATCACCAGCAATAGGGTTGCAAGGACATTTTCCTTCTGGCCAACCAAATATTGCTTACATGAGGTCAGGTCTAGATCTTCTTGGTGCAACCGGACTTCCATTATGGATAACAGAAGCCAGTATGGACCCACACCCAAATCAGGCAGAGTACTTTGAAGAAGTTCTAAGAGAGGCATACTCTCATCCTGCTGTAAAAGGGATTATAATGTTTGCGGGTCCAATAAGAGCTGGTTTCACTAAGACGCCTCTTACTTATGCCAATTTGCGAAATACTCCAACTGGGAACGTTGTGGACAAGTTGATTCATGAGTGGGGAACTGGGCCTCGAAAGGCCATAGCAGATAGCAGAGGAATTGTTGATATTTCACTGCAACATGGAGATTATGATGTCACTGTTACACATCCCTTAACCAACTTCTCCAAAACTATGAATCTAAGTGTGAGGAGAGGATTTTCACAGGAAACCATCATCCGTGTGAAAATGCATGCCTAA 1032 0.406 MNRYILKFRHYRKWFLSRFKYTTFTNEMKWYSTEKVQGQENYSIPDAMLKFTKENYISVRGHNIFWDDPKYQPEWVKSLSPEDLQKAADKRINSVVSRYKGEVIAWDVVNENVHFHFFEDKLGVNASSVFYSTAYKLDPNTTMFFNEYNTIEYSGDKVASPANYIQRVKEILTYPGTDGISPAIGLQGHFPSGQPNIAYMRSGLDLLGATGLPLWITEASMDPHPNQAEYFEEVLREAYSHPAVKGIIMFAGPIRAGFTKTPLTYANLRNTPTGNVVDKLIHEWGTGPRKAIADSRGIVDISLQHGDYDVTVTHPLTNFSKTMNLSVRRGFSQETIIRVKMHA. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07685 343 Gene3D Glycosidases 1 283 - -
Seca8g07685 343 SMART glyco_10 28 280 IPR001000 GO:0004553|GO:0005975
Seca8g07685 343 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 1 280 IPR001000 GO:0004553|GO:0005975
Seca8g07685 343 SUPERFAMILY (Trans)glycosidases 9 287 IPR017853 -
Seca8g07685 343 Pfam Glycosyl hydrolase family 10 10 241 IPR001000 GO:0004553|GO:0005975
Seca8g07685 343 PANTHER GLYCOSYL HYDROLASE 1 329 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07685 Seca-Chr8 174149003 174151207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07685 1 343 Glycoside Hydrolase AT4G33810 53.582 7.11e-129 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07685 - - gsj:114403439 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07685 8 174149003 174151207 Seca8g07685 8 174149003 174151207 ECH