Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07656 ATGGTTTTGAACTCAATGGCTGCTTCAGTAAGCGATCTAAGTTTTGTAAGGCTATCTAGTGTTGCTAGAAACCCTTCAGTTGATTTGAAGAATTGGGTTTTTGGTGGTCGAGTTTTCAATCTTGGATTTTGTTCCAAAGGAGAGAAATGGAAGGCAAATCATGGGGTGAAGGTTCGTGCAGCTGTTGATGTGGATGTGGCCGTGGAGGGATCGAAGAGTAATGCATTGGGGGGAAGTTTTGGGTTGGATGTGGTTTCAGAAGGAGACTTAATGGTGAAGGGGTTTAGGGGTTTGAGGAAGACGAAGCTCGTGTGCACAGTTGGTCCTGCGTGCAGCTCATTGGAGGATCTAGAGAAGTTGGCACTGGGAGGAATGAGTGTTGCTAGGCTCAACATGTGCCATGGTACCAGGGAGTGGCACCGTGATGTTATTAGGAAGATCAAGAAGTTGAATGAAGAAAAAGGTTTCTCTGTTTCTGTGATGATTGACACTGAGGGTAGTCAGATTCACGTTGTTGATCACGGGGCTCCTACCTCGGTTAAAGTAGAGGAAGATTCGATTTGGCGGTTTACTGCTGAACATTTTGAGGGTTCTCGTCCATTCAGCGTTCAAACAAACTATATTGGTTTTTCTGAAGGTATTGAAGTGGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGTAGTCATTGAGAAGACTGGAAATGATTTGCACTGTAAGTGCATAGATGCTGGTCTTTTCCTACCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTGAGGAGGAATTTCAAGCTCCCCACTCTATCAAAAAAGGATTGGGCTGACATTGACTTTGGTATAGCTGAGGGTGTTGATTTTTTTGCCTTATCCTTTGTTAATCATGCTGCTTCTGTTAAGGATCTAAAGAATTACCTCTCTGCCAAATCAACCAAATCCATAAAAGTATTGGCAAAGATAGAAAGCTTAGAATCCCTTCATAATGTGGAGGAAATAGTGGAAGCTTCTGATGGAATCATGGTGGCTCGTGGTGACCTAGGAGTTGAAATACCACTTGAACAGATTCCTACAGTCCAAGAGGATATAATTTACATTTGCAGACAATTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTTGAGTATCCAACACCAACACGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCTGGAGAGTCAGCTATTGGATCATATGGACAGAAAGCTTTGGCAGTATTGGATATGGCTAGCAGTAGAATGGAATCATGGAGTCGTGAGGAAAACAGACAAAGTCTTCTCAATCACCATAAACTCGGAGCATCACTGCCAGATTGCATCACTGAACAGATATGCAATTGTGCTGTTGAAATGGCCAACAACCTTGGCGTGGATGCCATCTTTGTATACACAAAGCATGGATACATGGCATCACTCCTATCACGAAACCGGCCAAATCCTCCCATATTTGCTTTCACCAATGATGAAAGTACCCGTATGGCTCTGAATTTGCAATGGGGTGTTGTACCTCTTCTTGTTGATTTGTCAGATGATGCTGAATCTAACATCTCAAAATCCGTCCAGCTTATGAAATCTAAAGGATTGATCAGCAAAGGAGATGTTGTTCTAGTGGTCTCAGATGTTGCTCCAACACGTACAACTATGTCTTTCCAAGCAATTCAGGTCAAGACTATTATCTAG 1752 0.4281 MVLNSMAASVSDLSFVRLSSVARNPSVDLKNWVFGGRVFNLGFCSKGEKWKANHGVKVRAAVDVDVAVEGSKSNALGGSFGLDVVSEGDLMVKGFRGLRKTKLVCTVGPACSSLEDLEKLALGGMSVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSVMIDTEGSQIHVVDHGAPTSVKVEEDSIWRFTAEHFEGSRPFSVQTNYIGFSEGIEVGDELVIDGGMACFVVIEKTGNDLHCKCIDAGLFLPGAKFSFWRDGKLVRRNFKLPTLSKKDWADIDFGIAEGVDFFALSFVNHAASVKDLKNYLSAKSTKSIKVLAKIESLESLHNVEEIVEASDGIMVARGDLGVEIPLEQIPTVQEDIIYICRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALAVLDMASSRMESWSREENRQSLLNHHKLGASLPDCITEQICNCAVEMANNLGVDAIFVYTKHGYMASLLSRNRPNPPIFAFTNDESTRMALNLQWGVVPLLVDLSDDAESNISKSVQLMKSKGLISKGDVVLVVSDVAPTRTTMSFQAIQVKTII. 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07656 583 Gene3D - 168 270 IPR015806 GO:0004743|GO:0006096
Seca8g07656 583 Gene3D - 432 578 IPR036918 -
Seca8g07656 583 Pfam Pyruvate kinase, alpha/beta domain 466 566 IPR015795 -
Seca8g07656 583 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 93 442 IPR015813 GO:0003824
Seca8g07656 583 ProSitePatterns Pyruvate kinase active site signature. 318 330 IPR018209 GO:0004743|GO:0006096
Seca8g07656 583 PRINTS Pyruvate kinase family signature 289 303 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 PRINTS Pyruvate kinase family signature 320 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 PRINTS Pyruvate kinase family signature 416 432 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 PRINTS Pyruvate kinase family signature 347 371 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 PRINTS Pyruvate kinase family signature 372 396 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 PRINTS Pyruvate kinase family signature 156 172 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 PRINTS Pyruvate kinase family signature 397 415 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 Pfam Pyruvate kinase, barrel domain 99 439 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 SUPERFAMILY PK C-terminal domain-like 460 568 IPR036918 -
Seca8g07656 583 Gene3D - 101 431 IPR040442 -
Seca8g07656 583 FunFam Pyruvate kinase 434 574 - -
Seca8g07656 583 PANTHER PYRUVATE KINASE 94 564 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 FunFam Pyruvate kinase 272 438 - -
Seca8g07656 583 NCBIfam pyruvate kinase 99 582 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca8g07656 583 SUPERFAMILY PK beta-barrel domain-like 169 252 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07656 Seca-Chr8 173873108 173878029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07656 K00873 - gmx:100780644 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07656 8 173873108 173878029 Seca8g07656 8 173873108 173878029 ECH