Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07488 ATGGATGAAACAGGACGAAAGAAGCATGTTAGGGAACCCCCTTCAGTTCCTTTCATTTGGGAAGTAAAGCCAGGCATTCCCAAGAAAGATTGGAAGCCAGAGGTCTCTTCATTTGTCCACTTACCTAAAACTCCACTCAAACTAATTGCCTCAGTTCCCTTTGTTTGGGAAGAAAAGCCAGGAAAACCCCTTCCTAGTTTCTCACATGTTTCAGTGGATTCTGTTCCTCCCAAACCAGATACAATCCTTATTCATGTAGCATCATCATCAGGATACTCTGTTGCCTCCAAGTCCAACTATGGCTATTATGACAAAGACAAAGAAAGCAACTACAGTGATGAGAGTGAAAGTACAACTAGCTTGGACCTTGAAGCATTTAGCTTTGATACAGATGAATCATTTAGCTCAGTTCCTTCTTTGCTTGCAAATTGTCTTGTATCATCATCCAAAATTTCTACTGCCATTCCACTGCAGAAAAACTCATTGTCAAAAGATAATAACTGTGAACAGCTGGATACCCCATCCTCCCCAGCCTCCTCTGACTCTGAGACAGACAGTTGCACAAGCAGTTATGTAACTGGCAGGTCAAGCCCAACTGGTTCTGCTTTTCTGGAATGTCTCTTTCCTTTGTATCCACCAACTAAGTCTAGCTTCCTTGAAAGAGATGGGCACTCAGAAAAGGTATCTTCATGTACACAAGAACTAAAAGTCAAAGATTTTGACCATGAAAATTATAGTTGTGACATGGTAAGAAGAGCACCAACACTTGGAGAGCTAATTATGATGAGCCGAAGAAGAAGCTACAGAAGGAAAGCAGCTCAAATGAAAAAATGGGATCCACCAAAGAAAATCACAAGAAAGGAAGCTTTTGGATGCTTCTCCATGGTAACCAGCACTAGCAGCAACATGATTGAGGGACTGCTGAAGAGAAAGTACCATCCAAGACTGAAACTGGTCTAG 960 0.4177 MDETGRKKHVREPPSVPFIWEVKPGIPKKDWKPEVSSFVHLPKTPLKLIASVPFVWEEKPGKPLPSFSHVSVDSVPPKPDTILIHVASSSGYSVASKSNYGYYDKDKESNYSDESESTTSLDLEAFSFDTDESFSSVPSLLANCLVSSSKISTAIPLQKNSLSKDNNCEQLDTPSSPASSDSETDSCTSSYVTGRSSPTGSAFLECLFPLYPPTKSSFLERDGHSEKVSSCTQELKVKDFDHENYSCDMVRRAPTLGELIMMSRRRSYRRKAAQMKKWDPPKKITRKEAFGCFSMVTSTSSNMIEGLLKRKYHPRLKLV. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07488 319 MobiDBLite consensus disorder prediction 164 191 - -
Seca8g07488 319 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 2 319 - -
Seca8g07488 319 Pfam Protein of unknown function (DUF688) 7 43 IPR007789 -
Seca8g07488 319 Pfam Protein of unknown function (DUF688) 50 128 IPR007789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07488 Seca-Chr8 171983200 171984558 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07488 - - aprc:113871264 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07488 8 171983200 171984558 Seca8g07488 8 171983200 171984558 ECH