Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07484 ATGGAGAACAAGGCAGGTGTTAAACTTCGATGCCAGAGGATTGGCTGCGATGCTATGTTCTACGAGGACGATAATCCTGACGGTTCCTGTCGATACCATGATTCGGTACCTATATTTCATGATGGCATGAAAGAGTGGAGTTGTTGCAAGAAAAGAAGTCATGATTTCAGCTTGTTTTTGGAAATTCCAGGATGTAAGACAGGAAAACATACAACAGAGAAGCAAGTAGTTGCACCGGTTAAGAAGAAGGCTGTGCCCCCTCCAACTGCTGCTCCTTCAACCAATGCATCAGCAAAGGACTCCTGTTCTAGGTGTCGGCAGGGTTTCTTTTGCTCAGATCATGGTTCACAAAGCAGATCTGTAAATATTGTTGGAGACAAATCTGTAAATCTTGCGAGAGATGCCTCTGCTGAAAACAATTCAAGCGTTCAGGCTCCAAAACCTCCTAAGAAGATAGTCGATATAAATGAGCCCCAAATATGCAAAAATAAAGGATGTGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAGCTACCATCCAGGCCCTGCTGTTTTTCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAGCATTCCTCCATGCACAAAGGGCTGGCATAATGCTGATCCAGTGTCCTGA 681 0.4361 MENKAGVKLRCQRIGCDAMFYEDDNPDGSCRYHDSVPIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKQVVAPVKKKAVPPPTAAPSTNASAKDSCSRCRQGFFCSDHGSQSRSVNIVGDKSVNLARDASAENNSSVQAPKPPKKIVDINEPQICKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCTKGWHNADPVS. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07484 226 ProSiteProfiles CHORD domain profile. 11 70 IPR007051 -
Seca8g07484 226 MobiDBLite consensus disorder prediction 81 101 - -
Seca8g07484 226 ProSiteProfiles CHORD domain profile. 161 220 IPR007051 -
Seca8g07484 226 Gene3D - 153 223 - -
Seca8g07484 226 Gene3D - 2 74 - -
Seca8g07484 226 FunFam Cysteine and histidine-rich domain-containing protein RAR1 152 223 - -
Seca8g07484 226 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 4 225 IPR043316 -
Seca8g07484 226 FunFam Cysteine and histidine-rich domain-containing protein RAR1 2 74 - -
Seca8g07484 226 Pfam CHORD 160 220 IPR007051 -
Seca8g07484 226 Pfam CHORD 10 70 IPR007051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07484 Seca-Chr8 171910305 171916271 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07484 K13458 - gmx:100194419 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07484 8 171910305 171916271 Seca8g07484 8 171910305 171916271 ECH