Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07482 ATGCTTCCCAATTCACTTCACCCCTCGCCGGAACCCCAACCACTCAGAAAAGAGCTCCCCGACCCCAACAAGACCAAGACCTCTCTCACCGCCCTTCTTCAACCCCTTTTCTCCCCTCAAAATCCTCGCTCATGGATTCTCTTCATCCTCCTCTTCATCCAGATCCTCCTCCTCTGCAACCTCCGTAGCTTCCCCACCTTAATCTCCATCCCACACCGCCACCTCCCCACTCCCCTCGCTGCCATCCACGAAACACCACCCACTGAAAATGCCACCGTTCAGGACTCTTCTCCCACCGCCAACGACGACCAATGTGGTTCCGGCAGGGTTTTCGTCTACGAACTTCCCACTACCTTCAACCAAGAAATCCTCGACAATTGTGACAACCTCAACCCATGGAGCTCTCGTTGCGACGCCCTTTCCAACGACGGCTTCGGGCAGAGGGCAACCGGGCTCGCCGGACTCGTGCCGGAGGATCTACTTCCGGCGTGGTACTGGACGGACCAATTCGTCTCCGAAATTATCTTCCACAATCGCTTACTTAACCACAAGTGCAGGGTCACGGAGCCAGAATCCGCTACGGCGTTCTACATCCCATTCTACGCTGGACTCGCAGTGGGGAAGTACCTGTGGACAAACTCAACCGCAGAGGATCGCGATCGCCACTGCGATATGATGCTGCGGTGGCTTCAGGAGCAACCGCACTACAGAAGATCCAACGGCTGGGATCACTTCATCACGATGGGGCGCATCACATGGGATTTTCGCCGCTCCAAAGACGAGGATTGGGGTTCTAGCTGCATCTATAAGCCAGGGTTAAGAAACATCACGCGCCTTCTCATCGAGCGTAACCCTTGGGACTATTTCGATATCGGTGTTCCCTACCCCACCGGATTCCACCCCAGCTCCCCACACGATGTCACGCGCTGGCAGAGCTTCGTCCGAGAGCGCCGCCGTAATGCGCTCTTCTGCTTCGCCGGCGCGCCTCGCCGCGCCTTCCGCAACGATTTCAGGGGAGTTCTGCTGAGTCAGTGCCGTGACTCGGCCGGGTCGTGCCGCACCGTAGACTGCGCCGGGACTCGGTGCTCGAACGGCACGTCGGCGATCCTCGAAACGTTTCTCGACTCGGAGTTTTGCTTGCAGCCGAGGGGAGATAGCTTCACGCGCCGGTCGATTTTCGATTGCATGGTGGCCGGTTCGATCCCGGTTTTTTTCTGGCGGCGAACCGCGTATTTACAGTATCAGTGGTTCTTGCCTGATGAACCGGGGAGTTATTCGGTTTACATAGACCGGAATGCCGTGAAGAACGGGACTTCCGTGAAAGCGGTGCTTGAGGGATACAGTAAAGAGGAGGTGAGGAAAATGAGGGAGAAAGTGATTGAGTACATTCCAAGGTTGGTTTATGCAAAACATAACAAAGGGTTAGAGGGTATGAAAGATGCCTTTGATGTTGCCATGGAAGGGGTGCTAAGGAGGTTTAAGGATCAACAACAACAAGGGTTCAATAAGTGGTAA 1515 0.5531 MLPNSLHPSPEPQPLRKELPDPNKTKTSLTALLQPLFSPQNPRSWILFILLFIQILLLCNLRSFPTLISIPHRHLPTPLAAIHETPPTENATVQDSSPTANDDQCGSGRVFVYELPTTFNQEILDNCDNLNPWSSRCDALSNDGFGQRATGLAGLVPEDLLPAWYWTDQFVSEIIFHNRLLNHKCRVTEPESATAFYIPFYAGLAVGKYLWTNSTAEDRDRHCDMMLRWLQEQPHYRRSNGWDHFITMGRITWDFRRSKDEDWGSSCIYKPGLRNITRLLIERNPWDYFDIGVPYPTGFHPSSPHDVTRWQSFVRERRRNALFCFAGAPRRAFRNDFRGVLLSQCRDSAGSCRTVDCAGTRCSNGTSAILETFLDSEFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYQWFLPDEPGSYSVYIDRNAVKNGTSVKAVLEGYSKEEVRKMREKVIEYIPRLVYAKHNKGLEGMKDAFDVAMEGVLRRFKDQQQQGFNKW. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07482 504 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 109 489 IPR004263 GO:0006486|GO:0016757
Seca8g07482 504 MobiDBLite consensus disorder prediction 87 103 - -
Seca8g07482 504 MobiDBLite consensus disorder prediction 80 103 - -
Seca8g07482 504 MobiDBLite consensus disorder prediction 1 23 - -
Seca8g07482 504 Pfam Exostosin family 105 441 IPR040911 -
Seca8g07482 504 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07482 Seca-Chr8 171875992 171877506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07482 - - gsj:114403132 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07482 8 171875992 171877506 Seca8g07482 8 171875992 171877506 ECH