Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07480 ATGATCAAAGAGGTTCTTCTTCTTCTTCTGCTCTTCTTGGCCTCTGGATTGACACTCTCAGTCTCTGAGTCCCAACCTGCTTCTCTACTGCCTCATGCTGCTGAGTCCTTCAATATCAGCTATATCCAGCTGAAGAACGCGGGTAGCTGTTCTTACTTGGTGGTTATATCTACTAGTTGTTCGTCTCCTAGGTATACAACGGATCAGATCAGTATTGCTTTTGGAGATGCTTATGGCAACCAGATATATGCTCCAAGACTGGATGATCCAGCTTCAGGTACATTTGAGAGCTGTTCTTCAGATACATTTCAGATAAATGGTCCATGTGCATATCAGATATGTTATGTGTACCTATATAGATCTGGATCGGATGGTTGGAAACCTGAAAGTGTGAAAATCAACAGTTATAACAGCAGGCCTGTTACTTTCTATTACAACACTTTCATCCCCCGGGATACATGGTATGGGTTTAACTTGTGCAATGATGCAGCTTCTTCATACAAAGTATCTGCTCAGAAATGGCTTATATGTATGATTCTAGGATTAGTTCTTAGTTTTTGGTTGTAA 567 0.4092 MIKEVLLLLLLFLASGLTLSVSESQPASLLPHAAESFNISYIQLKNAGSCSYLVVISTSCSSPRYTTDQISIAFGDAYGNQIYAPRLDDPASGTFESCSSDTFQINGPCAYQICYVYLYRSGSDGWKPESVKINSYNSRPVTFYYNTFIPRDTWYGFNLCNDAASSYKVSAQKWLICMILGLVLSFWL. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07480 188 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 157 IPR036392 GO:0005515
Seca8g07480 188 Gene3D PLAT/LH2 domain 48 157 - -
Seca8g07480 188 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 6 163 - -
Seca8g07480 188 CDD PLAT 50 161 - -
Seca8g07480 188 Pfam Embryo-specific protein 3, (ATS3) 42 160 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07480 Seca-Chr8 171837783 171839886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07480 - - gmx:100305495 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07480 8 171837783 171839886 Seca8g07480 8 171837783 171839886 ECH