Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07463 ATGGCTATGGCTTTCTCCTCTAGGTTTGACCACTCCATCATCTCTGCGTTCAAACCCCAAAACTCCATTCTCCCACCGTCAATCCAACCTTCCTCCTATCTCCCATGCCCTTCTTCGTTCAAACTTCAAAAGCTTCCTTTCAGAGTCCGCCATACTCCAATTATCAGAGCCACTTCATCATCCTCTTCTCCTCCCACAACCATTGCCGAACCTGAAGGCATTAAGATTAACTCGATTCCAACCAAACCCATCGAAGGACAAAAGACTGGTACCAGTGGGCTGCGAAAGAAGGTGAAAGTGTTTATGGAAGAAAATTACCTTGCAAATTGGATCCAGGCACTGTTTAATTCGTTGCCTCCAGAGGATTACAAGAATGGTTTGTTGGTGTTAGGAGGTGATGGTCGATACTTCAATCGGGAAGCTTCTCAGATTATAATCAAAATTGCTGCTGGAAATGGTGTTGGGAAAATTCTGGTTGGAAAAGAAGGTATATTGTCAACACCAGCTGTTTCTGCTGTGATAAGGAAGAGGAAGGCAAATGGTGGATTTATTATGAGTGCAAGCCATAATCCTGGTGGGCCTGAATATGATTGGGGTATTAAGTTTAATTACAGTAGTGGGCAACCTGCACCAGAATCCATCACTGACAAGATTTATGGAAACACCCAATCAATATCTGAGATAAAGATAGCGGACATTCCTGATGTTGACTTATCAAATGTTGGGGTTACCAAGTATGGAAGCTTCAGTGTAGAAGTAATAGACCCAGTTTCTGATTATCTGGAGCTATTGGAGACAGTATTTGATTTTCAGCTAATCAAAGGTCTTCTTTCACGGCCAGATTTTAGGTTCATATTTGATGCCATGCATGCAGTTACTGGTGCTTATGCTAAACCCATCTTCGTTGATAAACTTGGTGCTAGTCTGGATTCAATTTCAAATGGAATCCCTTTGGAAGATTTTGGACATGGTCACCCTGATCCTAACCTAACATATGCGAAGGATCTTGTCAACATTATGTATGCTGAAGATGGACCTGATTTTGGAGCTGCCAGTGATGGTGATGGTGATAGAAATATGATTTTAGGAAGAAGTTTCTTTGTAACTCCTTCAGACTCTGTAGCAGTTATTGCAGCCAATGCAAGAGAAGCGATTCCATATTTCAAGGACAGTGTTAAGGGTCTTGCTCGATCAATGCCAACAAGTGGTGCTCTGGATCGTGTTGCTGAAAAATTGAGCCTCCCTTTCTTTGAGGCATGCTTTATTTATTCCTTTTTTAAATTTATTTCTTCTTAA 1296 0.4151 MAMAFSSRFDHSIISAFKPQNSILPPSIQPSSYLPCPSSFKLQKLPFRVRHTPIIRATSSSSSPPTTIAEPEGIKINSIPTKPIEGQKTGTSGLRKKVKVFMEENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNREASQIIIKIAAGNGVGKILVGKEGILSTPAVSAVIRKRKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTQSISEIKIADIPDVDLSNVGVTKYGSFSVEVIDPVSDYLELLETVFDFQLIKGLLSRPDFRFIFDAMHAVTGAYAKPIFVDKLGASLDSISNGIPLEDFGHGHPDPNLTYAKDLVNIMYAEDGPDFGAASDGDGDRNMILGRSFFVTPSDSVAVIAANAREAIPYFKDSVKGLARSMPTSGALDRVAEKLSLPFFEACFIYSFFKFISS. 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07463 431 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 74 426 IPR045244 GO:0004614|GO:0005975
Seca8g07463 431 SUPERFAMILY Phosphoglucomutase, first 3 domains 258 367 IPR016055 GO:0005975|GO:0016868
Seca8g07463 431 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 182 191 IPR016066 GO:0000287
Seca8g07463 431 Gene3D - 367 430 - -
Seca8g07463 431 SUPERFAMILY Phosphoglucomutase, first 3 domains 354 419 IPR016055 GO:0005975|GO:0016868
Seca8g07463 431 Gene3D - 264 366 - -
Seca8g07463 431 PRINTS Phosphoglucomutase/phosphomannomutase family signature 346 361 IPR005841 GO:0005975|GO:0016868
Seca8g07463 431 PRINTS Phosphoglucomutase/phosphomannomutase family signature 317 330 IPR005841 GO:0005975|GO:0016868
Seca8g07463 431 PRINTS Phosphoglucomutase/phosphomannomutase family signature 181 195 IPR005841 GO:0005975|GO:0016868
Seca8g07463 431 PRINTS Phosphoglucomutase/phosphomannomutase family signature 281 300 IPR005841 GO:0005975|GO:0016868
Seca8g07463 431 FunFam Phosphoglucomutase 5 264 366 - -
Seca8g07463 431 SUPERFAMILY Phosphoglucomutase, first 3 domains 76 288 IPR016055 GO:0005975|GO:0016868
Seca8g07463 431 Gene3D - 75 263 - -
Seca8g07463 431 FunFam Phosphoglucomutase 5 75 263 - -
Seca8g07463 431 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 259 362 IPR005845 GO:0005975
Seca8g07463 431 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 87 227 IPR005844 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07463 Seca-Chr8 171644685 171655451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07463 K01835 - gmx:100802730 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07463 8 171644685 171655451 Seca8g07463 8 171644685 171655451 ECH