Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07454 ATGACAGAGAGGCCAACAGCGACGAAGAAGAGAAAAATGGGAGACAGAAAGGAGAAAGGTCCTAAGAAGCCTGCCACACAATGGCCTTCCATCAAACACAAAAAGAATCTTCAGATTACCCGCATCCGAGATGACGATCTCTTCACGGTCCCGAACTTTTTCTCCTCTGCTGAATCAAAGGCATTTGTTAAAACTGCTGAGGGAATTGGTTTTGCTCATCAAGGGAGTCTGGGTCCGGCTAAAGGTGAAGCTTACAGAGATAATGATCGAATTTCAGTGAATGATCATGTCCTTGCAGATACAATTTGGGAGTCTGGACTTAGCAAACTATTTTCTGATATAAGAATTCGAGGGAAGGCCGCTGTAGGTCTGAATCCAAATATTAGATTCTATAGGTACAAGGTTGGTCAACACTTTGGACGACATATTGATGAAAGTGTTCATCTAGGAGACGGAAAACGCACTCATTATACTTTGCTAGTGTATTTAAGTGGTGGGCCTGGCGAAGTTAAATCAAAGCCCAAAAATGATTCCAGTAACCCCACAGATTCACCTTTTGATCCTTTAGTTGGAGGAGAAACAGTGTTCTATGGACCAAGAAATAGCACTGTGGCTGAGGTAGCTCCTATTGAAGGGATGGCACTCTTGCACCTTCATGGAGAAAAATGCTTGTTGCATGAAGCCAGAAATGTTACTAAGGGTGTCAAATATGTGTTTCGTTCAGATGTAGTATTTGCTTGA 741 0.4251 MTERPTATKKRKMGDRKEKGPKKPATQWPSIKHKKNLQITRIRDDDLFTVPNFFSSAESKAFVKTAEGIGFAHQGSLGPAKGEAYRDNDRISVNDHVLADTIWESGLSKLFSDIRIRGKAAVGLNPNIRFYRYKVGQHFGRHIDESVHLGDGKRTHYTLLVYLSGGPGEVKSKPKNDSSNPTDSPFDPLVGGETVFYGPRNSTVAEVAPIEGMALLHLHGEKCLLHEARNVTKGVKYVFRSDVVFA. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07454 246 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 123 246 IPR005123 -
Seca8g07454 246 MobiDBLite consensus disorder prediction 1 29 - -
Seca8g07454 246 Gene3D q2cbj1_9rhob like domain 32 241 - -
Seca8g07454 246 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 35 240 IPR045054 -
Seca8g07454 246 MobiDBLite consensus disorder prediction 1 23 - -
Seca8g07454 246 MobiDBLite consensus disorder prediction 169 188 - -
Seca8g07454 246 SMART p4hc 45 244 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07454 Seca-Chr8 171580460 171583108 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07454 - - gmx:100526938 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07454 8 171580460 171583108 Seca8g07454 8 171580460 171583108 ECH