Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07446 ATGGGTTCCTCTGCTTCAAGAAAAACTAAAGCAGATTCAGCATCATGGTACTGTGCCATAGCGTTGTTGGGTATGATATTGTTGGGGTCCATAAGGGAGAGCAGCACTACAAGTGAAGAAGGTGATGCGATAAGAGGGAACAACCTCCGTGACCGGGCGTGTGATGAGATATATGTGGTGGGAGAAGGGGAGACCCTGCACACCATCAGTGATAAGTGTGGAGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGATGTCTTCCCTGGCCTTGTCATCAAAATCACCCCCATCAATACTAGGTAG 318 0.4969 MGSSASRKTKADSASWYCAIALLGMILLGSIRESSTTSEEGDAIRGNNLRDRACDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKITPINTR. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07446 105 CDD LysM 57 99 IPR018392 -
Seca8g07446 105 Gene3D LysM domain 51 105 IPR036779 -
Seca8g07446 105 Pfam LysM domain 58 100 IPR018392 -
Seca8g07446 105 PANTHER EMBRYO SAC 1 6 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07446 Seca-Chr8 171471459 171471776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07446 - - gmx:100500258 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07446 8 171471459 171471776 Seca8g07446 8 171471459 171471776 ECH