Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07430 ATGGCAGCCTTAAACTGCCAGTTTCATTCCATCAACTACTTGAACTCTCAGAATGTCAAAAGAAAAAACAAGCATTTCATTTCTTGCACAGCGCAGCCTATGCAAAGCAATATAAAGGTTGTGATAAATGGAGCAGCTAAGGAAATAGGAAGAGCAGCAATAGTAGCTGTGACTAAGGCCAGAGGAATGGAGGTAGCTGGAGCGGTGGATAATTATCATGTTGGGGAAGATATTGGAAAGGTCTGTGGCATGGAAGAGCCACTTGAAATACCCATCATAAATGACCTTACTATGGTTTTAGGCTCTATATCTCAGTCCAAGGTACCAGCAGTTGTTGTTGATTTCACTGACCCTTCCTCAGTATATGACAATGTAAAACAGGCAACAGCATTTGGCATGAACAGTGTCGTTTACGTGCCCCGAATCAAATTAGACACGGTAGCTGCATTATCTGCACTCTGCGAGAAGGCCAGCATGGGTGTGTTGGTTGCACCAACCCTTTCCATAGGATCAATATTATTGCAACAAGCTGCAATTTCAGCTTCTTTCCATTACAGCAATGTTGAAATTGTGGAATCCAAGGCTAATGCAAATGTAAGAGTTTATTTTCTATGTTTTTAG 621 0.4155 MAALNCQFHSINYLNSQNVKRKNKHFISCTAQPMQSNIKVVINGAAKEIGRAAIVAVTKARGMEVAGAVDNYHVGEDIGKVCGMEEPLEIPIINDLTMVLGSISQSKVPAVVVDFTDPSSVYDNVKQATAFGMNSVVYVPRIKLDTVAALSALCEKASMGVLVAPTLSIGSILLQQAAISASFHYSNVEIVESKANANVRVYFLCF. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07430 206 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 192 IPR036291 -
Seca8g07430 206 Pfam Dihydrodipicolinate reductase, N-terminus 38 165 IPR000846 GO:0008839|GO:0009089
Seca8g07430 206 PANTHER DIHYDRODIPICOLINATE REDUCTASE 22 198 IPR023940 GO:0008839|GO:0009089
Seca8g07430 206 Gene3D - 37 195 - -
Seca8g07430 206 FunFam Dihydrodipicolinate reductase family protein 37 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07430 Seca-Chr8 171274776 171276921 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07430 K16908 - gmx:100782083 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07430 8 171274776 171276921 Seca8g07430 8 171274776 171276921 ECH