Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07406 ATGGAAGACGGCGACTATAACATAAGGAGATGGGAGGATTTGGACATAGATATTTTGGTGAAGATTTTTCAGTTGCTTGACATCTTTGAGTTAACTTCTGGCATTGCTCATGTTTGTAGTGCATGGCGCATGGCTTGCTGTGATCCACTTCTTTGGAAGACACTCGACTTGTCTATGTTAAGATCTAATTTCATCAAGATTCCATTAGAGCCATTTGTTTATGTTGATGGACGATCTGATAGGACATTAACCCGTTTATTGAAGATTTCCTTGAGTCTCAGCAGGCAGAGTATAGTGACATTGATCTTCCATTTCAACTTGTACGTTAGTGATGAACAGTTGACATACACTGCTGAAAGGTGCCCACAACTCAGACGACTTGTTCTGCCAGCTTGGAACAGAATTAAGAGAACAGGAATGTGCAAGGCCATCCGCGGCTGGAAAGATCTAGAGTCGCTGACAATGCCTAGTATAGCAAACCCTCCATATCTTCTGGAGGAAATCTCAACACACTGCAAGAATTTCAGTGAACTCAAGATTATGGGGCCATGTGACATTTTCTTTGCTTCATCTCTTGCTGCGTTTCTTCCAAAATTAAGAGTTTTGAGCCTTCGTTGCTCAATGCTATATAAGGATGTTCTCATTCTCATCCTAGACAGCTTACAACATTTAGAAGTGCTCAACATATCACATTGCATTCTGGTGGAAGCCCTTCCGCCTCCTCAGCACAAAAGAATTATCAAAGAAATTGATCAATCTATTCGTCAGAAGGCTTCTCGGTTACGGGAATTTATCACATGCATGGAAGACTCATGCATCATGTGCCAGCGAACAAGAACTGATGAAGGGCTAGTTAGGTGGTACAAGTATGAGGAAGGGCTTTGGAAAGCAGATGAGGTGAGGTCTCTTGCACTTTAA 918 0.4205 MEDGDYNIRRWEDLDIDILVKIFQLLDIFELTSGIAHVCSAWRMACCDPLLWKTLDLSMLRSNFIKIPLEPFVYVDGRSDRTLTRLLKISLSLSRQSIVTLIFHFNLYVSDEQLTYTAERCPQLRRLVLPAWNRIKRTGMCKAIRGWKDLESLTMPSIANPPYLLEEISTHCKNFSELKIMGPCDIFFASSLAAFLPKLRVLSLRCSMLYKDVLILILDSLQHLEVLNISHCILVEALPPPQHKRIIKEIDQSIRQKASRLREFITCMEDSCIMCQRTRTDEGLVRWYKYEEGLWKADEVRSLAL. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07406 305 Gene3D Ribonuclease Inhibitor 77 238 IPR032675 -
Seca8g07406 305 Pfam F-box-like 17 57 IPR001810 GO:0005515
Seca8g07406 305 Gene3D - 6 56 - -
Seca8g07406 305 SUPERFAMILY F-box domain 11 63 IPR036047 GO:0005515
Seca8g07406 305 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 8 260 - -
Seca8g07406 305 SUPERFAMILY RNI-like 91 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07406 Seca-Chr8 170994852 170998660 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07406 - - gmx:100789355 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07406 8 170994852 170998660 Seca8g07406 8 170994852 170998660 ECH