Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07390 ATGGCTGTTCATGATGATTGTAAATTAAAGTTCCTGGAGCTAAAGGCAAAGAGGAACTACCGTTTCATTGTGTTTAAGATTGAGAACCAAGACGTGGTAGTGGAGAAACTTGGAAGTCCACAAGAAACCTATGAGGACTTTACTGCATCTTTGCCTCCTAATGAGTGTCGTTATGCTGTCTATGATTTTGATTTCACCACTGATGAGAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGTGTCCGGATATATCAAAGGTGAGAGAAAAGATGGTCTATGCTAGCTCCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAAGTTGAGTTGCAAGCAACAGATCCTAGTGAGATGAGCTTTGATATCATAAAAGCACGAGCAATTTGA 393 0.4046 MAVHDDCKLKFLELKAKRNYRFIVFKIENQDVVVEKLGSPQETYEDFTASLPPNECRYAVYDFDFTTDENCQKSKIFFIAWCPDISKVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07390 130 PANTHER COFILIN-RELATED 1 129 IPR017904 GO:0015629|GO:0030042
Seca8g07390 130 SUPERFAMILY Actin depolymerizing proteins 2 128 - -
Seca8g07390 130 ProSiteProfiles ADF-H domain profile. 1 130 IPR002108 GO:0003779
Seca8g07390 130 FunFam Actin-depolymerizing factor 2 1 130 - -
Seca8g07390 130 Pfam Cofilin/tropomyosin-type actin-binding protein 7 127 IPR002108 GO:0003779
Seca8g07390 130 CDD ADF_cofilin_like 1 129 IPR017904 GO:0015629|GO:0030042
Seca8g07390 130 SMART adf_2 5 130 IPR002108 GO:0003779
Seca8g07390 130 Gene3D Severin 1 130 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07390 Seca-Chr8 170820114 170822129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07390 K05765 - aip:107616096 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07390 8 170820114 170822129 Seca8g07390 8 170820114 170822129 ECH