Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07385 ATGGTTTCACAGTACGGAATCAAGTTCGCCATCCACCTTATCACCAACCACTTTGGCAATCTCGTCGCTAAAGTATGCGAAAAACTACTTGGCAATGGACCCCTCACTTTGGAACAGTTGATTCGTTACACGGAGCTCACCAAGGAGCAAGTTAAAAACTCCCTACTGGTCTTAGTTCAACATAATTGTGCCCAAGCATTTGTTTATGAAGGTGGTGATGGGGATGGATTGAGAGTTAGGACACAGTACCTGGCATTGTTTGATAACATACTCCATCGATTGAGATTTCCCAAATTCTTGGAGATTACATCACGGCACCTTGATGATGAAAAATTCGAAGCACCAGAGACCTTAGAACAACGTGTTATAGAAGCAGCAGTGCCTGGGGCAGCGATCAGATTTTCACTCACTACAGATACAGGATGTAATGCTGACAGAGAAACAAATTCAGATGATTCCCAAATGATGAGTGTTGGAGAAAATGATGGTAAAACTATTATCATCTGA 507 0.4221 MVSQYGIKFAIHLITNHFGNLVAKVCEKLLGNGPLTLEQLIRYTELTKEQVKNSLLVLVQHNCAQAFVYEGGDGDGLRVRTQYLALFDNILHRLRFPKFLEITSRHLDDEKFEAPETLEQRVIEAAVPGAAIRFSLTTDTGCNADRETNSDDSQMMSVGENDGKTIII. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07385 168 FunFam DNA-directed RNA polymerase III subunit RPC3 2 85 - -
Seca8g07385 168 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 1 110 IPR039748 GO:0003697|GO:0005666
Seca8g07385 168 Gene3D - 2 83 IPR036388 -
Seca8g07385 168 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 10 68 IPR013197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07385 Seca-Chr8 170731392 170734302 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07385 K03023 - qsu:111998987 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07385 8 170731392 170734302 Seca8g07385 8 170731392 170734302 ECH