Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07370 ATGGACCAACCTTCTCATCCCAAACTCAACAACCCTGCTCACCATGTTCTTCATTCCAATAAAGTCCCTTTCTTTGAAACGGTTTCCAAAGGAAAAGAAGTGGAAGATTTCAAAGAAAGAGCTCAAAGATTGGAGAGTGAGAGAGAAGAGAGAAATGGGTTGATCTTAAAGGCTCTGGAATCTCTCACTTCTATGAAGGATTGCTTATCTAGAGTCATAGAGGGGTTAGAGGGAGAAAAGGATGAAACTTTTTGTGGTGAAGGGGAGAGGGTTTGTGTGGAATCAGAATTGGGTGAGGAATCAAGGGTGTTATTGGAAGAGTCAAGGTTGATCTCAAGGCTTGCGATTGAGGTGGAAACAAGGGTGGATAAGTATAAGGAGTTGAGGAGAAAGGAGAAGAGAGAGTTGGAGAATAGCATGATCAGTTTAACTGAGGAGAATAGGGATATCACTAAATTGCTTAGGATTGCTCTGTTGGAGAAAGAAGCATTGGAGAAGAGAACGAAGGGACATGACCATAAAAGGATGCCCCTTTTGCAGTTTGCTGAGTTTGGATTGCAGAAAGTTGGGTTTGGTTTCATGATAGGGAGTGGTAATCATGAGCATCCAACAGATGGTTCTTCTGAGGCTAGCAAATCAGATAGTAGTGAGTGTGAAGAGGAAGTTGTTAGTCTGAATGGTGACACTTCTTATGGATATGATAGCTGTAGTCTACTTCTTGCAAAATGGTCAGACACAGAGCGCCTCCAGTGTCTCACAGAGAAACAAGCCAAAGAAATTGTAGAAAATAAACTCTACATTCAAGACTTAGAAGATAGAGAGAGAATCTTGGCTCAAAATGTAGAGGAGTTTTTGATGGAAATTAAAGAAGCAGAAGAAGAGGTAGCTAGATGGAAGGAAGCTTGTGAGTTGGAAGTTAAAGCTGGAAAGAATGAGATTGAAGAGCGTGACAAAGTGGTGGCTGCTTTGAAGCAAGAACTACAGAAAACCAAGGCTGCTTTGGACATAGCCAATGGAAAATTAAGGCTTAAAGAGGAACTTGCAACTGCTGCAATAGTTGCACAGGAAGCAGCAGAGAGGTCTTTGCATCTGGCTGATAGTAGAGCAGTTGAACTTCGTCAGCGGATTGAGGAACTAACCAGACAATTAGAGGAAGCAGAGAAACGTGAACACAGTAGCCATAAAAAAGCAGATAATAGCAGCAGTATGAAGAAAATAAATTCACCATGCGATGTTGAGGCTTTAAAGAAGTGTTTGGAAGAGAACAAAGGGGACTATGTCAAATGCCAGTCACAGATTGAGGCTTTTAAATCATCATGCTCACTGAAGAAACCAAATCCGTCTCTTGATTCTGCAACACCGCTCAAGACAGGTGTTTGA 1380 0.4174 MDQPSHPKLNNPAHHVLHSNKVPFFETVSKGKEVEDFKERAQRLESEREERNGLILKALESLTSMKDCLSRVIEGLEGEKDETFCGEGERVCVESELGEESRVLLEESRLISRLAIEVETRVDKYKELRRKEKRELENSMISLTEENRDITKLLRIALLEKEALEKRTKGHDHKRMPLLQFAEFGLQKVGFGFMIGSGNHEHPTDGSSEASKSDSSECEEEVVSLNGDTSYGYDSCSLLLAKWSDTERLQCLTEKQAKEIVENKLYIQDLEDRERILAQNVEEFLMEIKEAEEEVARWKEACELEVKAGKNEIEERDKVVAALKQELQKTKAALDIANGKLRLKEELATAAIVAQEAAERSLHLADSRAVELRQRIEELTRQLEEAEKREHSSHKKADNSSSMKKINSPCDVEALKKCLEENKGDYVKCQSQIEAFKSSCSLKKPNPSLDSATPLKTGV. 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07370 459 MobiDBLite consensus disorder prediction 197 221 - -
Seca8g07370 459 Coils Coil 362 396 - -
Seca8g07370 459 PANTHER OS08G0559800 PROTEIN 28 394 IPR040300 -
Seca8g07370 459 Coils Coil 313 340 - -
Seca8g07370 459 Coils Coil 59 79 - -
Seca8g07370 459 Coils Coil 115 153 - -
Seca8g07370 459 MobiDBLite consensus disorder prediction 205 219 - -
Seca8g07370 459 Coils Coil 34 54 - -
Seca8g07370 459 MobiDBLite consensus disorder prediction 383 401 - -
Seca8g07370 459 MobiDBLite consensus disorder prediction 440 459 - -
Seca8g07370 459 Coils Coil 267 308 - -
Seca8g07370 459 MobiDBLite consensus disorder prediction 383 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07370 Seca-Chr8 170487075 170491210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07370 - - aprc:113871808 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07370 8 170487075 170491210 Seca8g07370 8 170487075 170491210 ECH