Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07363 ATGACACAATCTTTGGCAATGGCTTCTTCAACCGTGTTATGTCCTAAATTGGGGACATGTGCAGTGTCACTATCAACTTCACACACAAAAGTTCAGTACTTTCATCTCTCTTCATGGTTATCTCCATTGGGTCGAAGCCTTTTCTCACCTTGGAATGGTTTAAAGCATCTGGGTATCTCAAGCAAACCAAAACCTCTTATTCATATAGATAGAAAGGGTTTGTGTAAGGGTAAAGTGGTTTATGCGTCTCTTTTTGGGGTTGGTGCCCCTGAAGCTCTGGTAATTGGGGTCGTCGCTTTGTTGGTTTTTGGTCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGTACATTTCAACCCACCATTAGAGAGCTTCAGGTTGGTGCAAAATACTTTAGATCAAAATTGTTATGTCAATGCCACTTAATAGATGCTTTGATGTTATTACTTGCCATTTTGTCCCCTTTAGGATGTTTCAAGGGAATTTAA 501 0.4052 MTQSLAMASSTVLCPKLGTCAVSLSTSHTKVQYFHLSSWLSPLGRSLFSPWNGLKHLGISSKPKPLIHIDRKGLCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQVGAKYFRSKLLCQCHLIDALMLLLAILSPLGCFKGI. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07363 166 Pfam mttA/Hcf106 family 87 132 IPR003369 GO:0015031
Seca8g07363 166 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 22 140 - -
Seca8g07363 166 NCBIfam twin-arginine translocase TatA/TatE family subunit 86 130 IPR006312 GO:0016020|GO:0043953
Seca8g07363 166 Gene3D - 84 131 - -
Seca8g07363 166 PRINTS Bacterial sec-independent translocation TatB protein signature 104 123 - -
Seca8g07363 166 PRINTS Bacterial sec-independent translocation TatB protein signature 84 104 - -
Seca8g07363 166 FunFam Sec-independent protein translocase protein TATB, chloroplastic 84 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07363 Seca-Chr8 170398839 170402991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07363 - - gmx:100781301 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07363 8 170398839 170402991 Seca8g07363 8 170398839 170402991 ECH