Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07362 ATGGATTCGAGCGACAAGAGGGATGAGGAGGATTGGGAGTATATCGATAAGAGGAAGCAGAGGTCAAGAAAGTATGGGAATGGGGACGAGGGTGAGGGTGAAGCCGAAGGTGAAGGTGAAGCTTCTGAGGGAAGCGGAAGAAGGAAGCGCTCTAGCAAAGGTGATGGTGACGATTACGATTCGCGTTCAAAGCATATGATGAAGAAGAGGCAAGAAGAGAGCACATTGGAAAAACTTAGCAGTTGGTATGAGGATGGAGAGTTGGATGCTGGAGACAAGATGGGGAGGAAGCCTTCCTCCAATTTAAACCCCAAGCACGATGGTAATTCCCACAACGCTAGTACTACCGGTAAAGAGGATTATAGGTACTCGGAGAAGAGTGAAAGTGGCCGAGACAAGGGTGGCCGTGGGTCTTCTGAGCATGTCAAGAGTTCCAGAAGGAAATGGGATGAAGCTGACACTGTCAGTGTTAGGAGAACACAGGATGGTGTTTCTGAGAAAGGTGATTTGAGAAGTGCTAAGGCCTCTGATGGTAAGCGTGACAGCTCTAAGGAGAGGAGTGGATCTGCTAGAAATGAACATGGGGAGGGTAGAACCTCTGGCAGTGACAAGGTTGCCAAATCTGGTAGTAAAGAAGATAGAAGAGGTGATTCTGAGAGAGGTAAGAGTAAAGGCAGGTCAGAATCGCTGGATGTTAGTCGTGAGGACAGAGCTGAGAAGCCTAGGCGTCACAGAACGCCTACTGGATATGATGTGGCTGAGACCTGGGACAGGCCAGTGAATGCAGATGAGGATGGAAATGTGCGGATTAGGGATAAAAGTACCAGAGAAACTGGGAACTCGAACAGATCGAGAACGCCTGAGAGGAGTGGAAGACGCCATCAAGATTCAGAAAACTCGGAGATGGATTATGAAAGAAGTAGTAGCTTTAAAAGGAAAGAAGTTGAAAATGATGGCTATAAGGATGATAGAACCAAGGGAAAAGATGATACTTGGAATGACAGGAAGAAGGATCGTGAAAGTTCTAAAGAAAGTTGGAAAAGGAGGCAGTCAAGTAATATTGACAAAGATTCAAAAAATGAGGACAGTGGTTTTGATCACAACAGAGAATGGGAGTTGCCAAGACATGGTTATGAGAGGATGGACAATGAAAGGCCTCATGGCCGGTCTGGTGGTAGAAAAGATGGAAACAGGGGGGAAGCAGTCAAAACATCAACAAAGTTTGGAATTTCAAATGATAACTATGATGTGATAGAGATCCAGCCCAAGTTTGTTGACTATGGGAAAGCAGAATCTATATCCAACCTTACCAAGAGAACTGAAACTAATCAACAGTACAATGCTAAATCAGGTACTAATTATGAAGAATGGTCATATCATCAGGAAGAAAGAGCAAGAAAGAGTGATTTATCTGGTTCTGGGACACCTGGTGAAGATCCAAAGGAGAGATATACTGATGATGACTATGATTATTATGGGGGAAGAGGAAGAGGACAGAAAGGTGTTGCATCTACTCGCAGCACTGGTGGTCAAAGTTCCAGTAGTGGTGGCTCACAGTCTCAATATGGAAACCCAGAGTCTGGATCCTTTAACAGAGCTGGTCCACAAGGAATAAAAGGGAACAGGGTCGGTAGAGGAGGAAGGATGAGGCCTACTGGGAGAGACAACCAGCAGGTTGGAATGCCATTGCCGATGATGGGATCACCCTATGGACCTCTTGGCATGCCTCCGCCTGGGCCAATGCAGCCTCTTACCCATGGTATGTCACCTGCTCCTGGTCCACCGATTTCCCCTGGTGTCTTTATTTCACCATTTACTCCAGGTGTTTGGCCGGGAGCTCGAGGTGTCGATATGAATATAATGGGTGTTCCACCTGCAGTGTCTCCTGTACCCCCAGGTCCTTCAGGTCCAAGATTTAATGCTGCTAATATAGGGAACCCACCAAATCCTGCAATGTATTATAACCAATCAGGCCCTGGAAGGGGAATTCCCCCAAACATATCTAGTCCTGGTTTTAATCCTACCGGACCAATGGGTAGAGGAACACCACCTGATAAAACTCCTGGGGGATGGGTTCCACCTAAAAGTAGTGGAACTCTTGGTAAAGCTCCTTCCAGAGGTGAACAGAATGATTATTCTCAAAACTTTGTTGACACTGGTATGCGGCCACAGAATTTCATTAGGGAGCTTGAGCTCACAAATGTTGTAGAGGACTACCCTAAGCTCAGGGAGCTTATACAGAAAAAGGATGAGATTGTGGAAAAATCTGCATCTGCTCCCATGTATTATAAGTGTGATCTGAAAGAGTTTGAACTGTCTCCAGAGTTCTTTGGAACAAAGTTTGATGTCATTCTTGTAGATCCCCCATGGGAGGAGTATGTGCACCGAGCCCCTGGTGTTGCTGACCACATGGAGTACTGGACATTTGAAGAAATAATGAATCTTAAGATTGAGGCTATAGCAGATACGCCTTCTTTCATCTTCCTTTGGGTGGGTGATGGTGTAGGTCTTGAGCAAGGCCGTCAATGTCTGAAGAAGTGGGGATTTCGTAGGTGTGAAGATATATGCTGGGTAAAGACAAACAAAAGTAATGCAACTCCAGGACTGCGGCATGATTCACATACTTTATTTCAACATTCAAAGGAGCACTGCTTGATGGGCATAAAAGGAACTGTTCGTCGAAGTACCGATGGCCATATAATCCATGCCAACATTGACACGGACGTAATTATTGCTGAAGAACCTCCTTATGGTTCAACACAAAAGCCTGAAGATATGTATAGGATCATTGAGCACTTTGCCCTTGGAAGGAGGAGACTTGAACTATTTGGTGAGGACCACAATATCCGAGCTGGTTGGCTGACCGTTGGTAAAGAACTCTCGTCTTCAAATTTTAATAAAGAGGCATATGTCAAGAATTTTGCTGATAAAGATGGGAAAGTTTGGCAGGGAGGTGGAGGAAGAAATCCACCTCCGGAGGCACCTCATTTGGTGGTGACTACTCCTGATATAGAGGCTCTTAGGCCAAAGTCCCCTATGAAGAACCAGCAACAAATGCAGCAGCAGCAATCAGTATCCATCTCTTTGACGTCAGCTAGTGCATCAAACAGAAGGCCTGCTGGGAATTCGCCGCAGAATCCAACGGCACTCGGTGTCAACCAGGACGCTTCTAACTCAAACCCTTCTACCCCTGCTCCTTGGGCTTCACCTCTGGAGAGCTTCAAAGGGCGTGAAGGTTCTGTATTGCCTTCAGATGATAAAGCATGTGATATGTATGGATTTCATGGACCGGCAACAGCAGGCTATCTAGATTTTGAATCATACAGACAAATGAATATGTTGTAG 3345 0.4574 MDSSDKRDEEDWEYIDKRKQRSRKYGNGDEGEGEAEGEGEASEGSGRRKRSSKGDGDDYDSRSKHMMKKRQEESTLEKLSSWYEDGELDAGDKMGRKPSSNLNPKHDGNSHNASTTGKEDYRYSEKSESGRDKGGRGSSEHVKSSRRKWDEADTVSVRRTQDGVSEKGDLRSAKASDGKRDSSKERSGSARNEHGEGRTSGSDKVAKSGSKEDRRGDSERGKSKGRSESLDVSREDRAEKPRRHRTPTGYDVAETWDRPVNADEDGNVRIRDKSTRETGNSNRSRTPERSGRRHQDSENSEMDYERSSSFKRKEVENDGYKDDRTKGKDDTWNDRKKDRESSKESWKRRQSSNIDKDSKNEDSGFDHNREWELPRHGYERMDNERPHGRSGGRKDGNRGEAVKTSTKFGISNDNYDVIEIQPKFVDYGKAESISNLTKRTETNQQYNAKSGTNYEEWSYHQEERARKSDLSGSGTPGEDPKERYTDDDYDYYGGRGRGQKGVASTRSTGGQSSSSGGSQSQYGNPESGSFNRAGPQGIKGNRVGRGGRMRPTGRDNQQVGMPLPMMGSPYGPLGMPPPGPMQPLTHGMSPAPGPPISPGVFISPFTPGVWPGARGVDMNIMGVPPAVSPVPPGPSGPRFNAANIGNPPNPAMYYNQSGPGRGIPPNISSPGFNPTGPMGRGTPPDKTPGGWVPPKSSGTLGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVEKSASAPMYYKCDLKEFELSPEFFGTKFDVILVDPPWEEYVHRAPGVADHMEYWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKSNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTVGKELSSSNFNKEAYVKNFADKDGKVWQGGGGRNPPPEAPHLVVTTPDIEALRPKSPMKNQQQMQQQQSVSISLTSASASNRRPAGNSPQNPTALGVNQDASNSNPSTPAPWASPLESFKGREGSVLPSDDKACDMYGFHGPATAGYLDFESYRQMNML. 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07362 1114 MobiDBLite consensus disorder prediction 1011 1067 - -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 643 718 - -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 118 401 - -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 501 531 - -
Seca8g07362 1114 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 775 929 IPR029063 -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 433 563 - -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 433 455 - -
Seca8g07362 1114 Pfam MT-A70 781 959 IPR007757 -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 702 718 - -
Seca8g07362 1114 ProSiteProfiles mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile. 554 1018 - -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 1 410 - -
Seca8g07362 1114 ProSiteProfiles MT-A70-like family profile. 740 979 IPR007757 -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 1 31 - -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 479 494 - -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 40 94 - -
Seca8g07362 1114 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 784 790 IPR002052 GO:0003676|GO:0008168|GO:0032259
Seca8g07362 1114 MobiDBLite consensus disorder prediction 1010 1082 - -
Seca8g07362 1114 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 215 1077 IPR045123 -
Seca8g07362 1114 MobiDBLite consensus disorder prediction 102 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07362 Seca-Chr8 170391645 170398062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07362 K23960 - gmx:100798100 1773.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07362 8 170391645 170398062 Seca8g07362 8 170391645 170398062 ECH