Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07350 ATGTCTCCGTTGGGAATTGTCACAGCTATGGAGCTTATTTTTTCAGTCATGTTTGTTGCACTCTTGATATGGTCACTCTCCAATTACTTACATATCAGCTTTGGCCACCTCCATATGCACAGGGCGGGTGAGAAAGTGTGGGAAGCAAAGTTGAGGAGTGTATCTCTGAGACTTGGGTACATAGGAAACATATGTTGGGCATTTCTATTCTTTCCAGTCACAAGAGGATCTTCCATTCTGCCCCTTGTTGGACTCACATCTGAATCAAGCATCAAATACCATATCTGGCTTGGACATCTATCCATGGTTCTTTTTGCTGGGCATACCATAGGTTTCATCATCTATTGGGCCATCACAAATCAAATGGCAGAGATGATAGAGTGGAGCAAGACATATGTATCGAATGTAGCAGGGGAGATAGCAAGTTTAATTGCTTTAGCCATGTGGGTGACTTCCATTCCCCGCATTAGGCGTAAGATGTTTGAGGTTTTCTTCTACACTCACTATCTCTACATTCTCTATATCTTATTTTATGCCATCCATGTCGGAGTTGCATACATGTGCATGATAGCTCCGGGGATCTTCCTATTCCTCATTGATAGACACCTCAGATTCTTACAATCTCGCCAACATGCTCGCTTGTTATCAGCTCGCCTTTTACCCTGTACAAATAATCTGAGTGTTGCCATAAAAATTGTGGGTAGCTGGTCAAACAAGCTTTATCAGGAACTTTCTTCCTCATCTTTGGATCATCTCAACATTTCTGTTGAAGGACCCTATGGACCACATACTGTACACTTTCTAAGGCATGAACAGCTTGTGATGGTGTGTGGTGGAAGTGGCATCGCTCCCTTCATATCCATAATCCGCGAGCTTATATTCCAAAGCCAACAACAAGGATTCCATGCTCCAAAAGTCCTACTTGTTTGTGCTTTCAAGAATTCTGCTGATCTAACCATGTTGGATCTTGTGCTTCCTGTCTCTGGCTCAACAACTCAAATCTCAGAGCTTCAGTTACAAATTGAAGCCTATATTACCAGAGAGAAAGAAGAACCCCCAATAGATTCCCAGATAGACATACAAACCAAATGGTTTAAGCCATCCCTCTCAGACTCTCCCATCTCTGTTGTATTAGGCCTAAACAACTGGCTATGGCTTGGTGCTATAATCTCATCATCATTCCTCATGTTCCTCCTCCTTTTAGGGATTGTCACACGTTATTATATTTACCCAATTGAGAATAACTCAGAAGAAGTTTATCACTGGACCTTCAAGGTTCTGTGGTTCCTGTTTCTACTCTGTGCAGGCATATGTATATGTTCTAGTGCAGTTTTTCTTTGGTGGAAGAGACAAAACACTTTTGAAGGTAAGCAAATCATGAATGTGGAAGTTCAAACACCAACAAGATCACCAGGGTCATGGATTTATGGCTCAGAAAGAGAGCTTGAAAGCCTTCCTCATCAGTCTTTAGTGCAATCTACCAAAGTACATTTTGGTGCAAGGCCTGATCTCAAGAAGATTCTGTTTGAGTGCAAAAGCAAAGATGTCGGAGTATTGGTCTGTGGCCCAAGAAACATGAGACATGAAGTTGCTAGAATTTGTGCTTCGGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTTAACTGCAAGGTTGGATTTTTAGGATTGGCATCATGGAAAAAACCATTTCTTGTAAATGGTCCTCTTGGGATTGTCTCTAGGACAGAGCTCTCTTTCATTATCATGTTTGTTTCACTATTAATTTGGTCCTTGTGCTCCTACTTGCATGCCATGTTTGCAAGCGTGGCCCTGCAGGCAGTTAACGAGAGAGAGCAAGTGTGGGAAGCCAAGTTGGAAAACTCAGCCCTGACTTTAGGCCTTGTTGGGAATATTTGCTTAGCATTTTTGTTTTTCCCTGTCTCAAGAGGGTCATCAGTTTTGCGGTTCATTGGCCTAACTTCAGAGGGAAGTATCAAATATCATATCTGGCTTGGACATATTACTATGGCCCTCTTCACAGCCCATGGACTATGCTATGTTACCTTTTGGGACAAGACACATCAAATCTCAGAGATATTCACATGGAACAAAGTTGGCATCTCAAATGTGGCTGGAGGAGTAGCTCTGCTTGCAGGATTAACCATATGGGCTGCTACCTTACCTTTCATAAGGAGGAAAGCTTTTGAACTTTTCTTCTACACTCATCACCTGTACATTGTTTTTGTAGTCTTCTTTGTGCTACATGTTGGATTTTCCTATTCTTGCATAATGCTTCCAGGATTTTACCTATTCTTGATTGACCGCTACCTGAGATTCCTACAGTCCCAGCAGAAAGTTCGGTTGGTTTCTGCCCGGTTGTGCTATGCTCCAACAAGTATCATTTTCATAAATGTTCCTACTATTTCCAAGTTGCAGTGGCACCCTTTTACTATCACCTCCAGCAGTGACACTGATTCTGATACATTAAGCATTGTCATCAAAAGTTCAGGAAGCTGGTCCCATGCTTTGTACCACAAATTAACATCTTCATCTCCACCGGCCCACCTTGATGTCTCCATTGAAGGGCCCTATGGACCAGCTTCAACCTTTTTCTCAAGGCATGAGATGCTAGTGATGGTGAGTGGAGGAAGTGGCATTACTCCTTTCATCTCCATAATCCGTTCACTACTCTTTAAGGCCAACACTGAAGGGGGAAAAGTTCCTAGAGTTCTTCTTATATGTGCCTTCAAGAAGTCCATTGATCTTACCATGATAGACCTCCTCCTCCCTGTTTCAGGCACTGCCTTTGACACCTCACGCTTGCAGCTTCAGATTGAAGCCTATGTAACAAGAGAGAAACAGCCAGCAATGAATGACAGAAAGCTTCTTCAAACATTATGGTTCAAATCAAATGCATCAGATGAACCAGTTTCTGCAGTCTTTGGACAAAACAGTTGGCTCTACCTTAGCATTATCATATCATCCTCCTTTATATTATTCCTTCTAATTATTGCCATCCTAACTAGATATTATATATATCCAATTGACCATAATTCTGACCTGATATACCCTTATTTCTCAAGGTCCATTCTAAACATGTTATTCATGTGTGTATCTATAGCCATTGCTGCTACATCTGCTTTTCTCTGGAACAATAAACAAAATAAGGATTTGAGGCAAATTGAAAACATGTATACATCCACTCCATCCACTTCTCCAGGCTCAGGATGCTACAATGCTGACAGAGAATTAGAGAGTCTTCCCCTCCAATCCATTATCCAAACAGCTAAAGTACATTATGGTGAAAGACCTGACTTGAAAAAAATACTCTCTAACTGTGATGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGGAAAATGAGGCATGCAGTAGCATCAATCTGTACATCTTGTTCGACAGATGACATACATTTTGAGTCCATTAGCTTCAGCTGGTGA 3447 0.4166 MSPLGIVTAMELIFSVMFVALLIWSLSNYLHISFGHLHMHRAGEKVWEAKLRSVSLRLGYIGNICWAFLFFPVTRGSSILPLVGLTSESSIKYHIWLGHLSMVLFAGHTIGFIIYWAITNQMAEMIEWSKTYVSNVAGEIASLIALAMWVTSIPRIRRKMFEVFFYTHYLYILYILFYAIHVGVAYMCMIAPGIFLFLIDRHLRFLQSRQHARLLSARLLPCTNNLSVAIKIVGSWSNKLYQELSSSSLDHLNISVEGPYGPHTVHFLRHEQLVMVCGGSGIAPFISIIRELIFQSQQQGFHAPKVLLVCAFKNSADLTMLDLVLPVSGSTTQISELQLQIEAYITREKEEPPIDSQIDIQTKWFKPSLSDSPISVVLGLNNWLWLGAIISSSFLMFLLLLGIVTRYYIYPIENNSEEVYHWTFKVLWFLFLLCAGICICSSAVFLWWKRQNTFEGKQIMNVEVQTPTRSPGSWIYGSERELESLPHQSLVQSTKVHFGARPDLKKILFECKSKDVGVLVCGPRNMRHEVARICASGLADNLHFESISFNCKVGFLGLASWKKPFLVNGPLGIVSRTELSFIIMFVSLLIWSLCSYLHAMFASVALQAVNEREQVWEAKLENSALTLGLVGNICLAFLFFPVSRGSSVLRFIGLTSEGSIKYHIWLGHITMALFTAHGLCYVTFWDKTHQISEIFTWNKVGISNVAGGVALLAGLTIWAATLPFIRRKAFELFFYTHHLYIVFVVFFVLHVGFSYSCIMLPGFYLFLIDRYLRFLQSQQKVRLVSARLCYAPTSIIFINVPTISKLQWHPFTITSSSDTDSDTLSIVIKSSGSWSHALYHKLTSSSPPAHLDVSIEGPYGPASTFFSRHEMLVMVSGGSGITPFISIIRSLLFKANTEGGKVPRVLLICAFKKSIDLTMIDLLLPVSGTAFDTSRLQLQIEAYVTREKQPAMNDRKLLQTLWFKSNASDEPVSAVFGQNSWLYLSIIISSSFILFLLIIAILTRYYIYPIDHNSDLIYPYFSRSILNMLFMCVSIAIAATSAFLWNNKQNKDLRQIENMYTSTPSTSPGSGCYNADRELESLPLQSIIQTAKVHYGERPDLKKILSNCDGSSIGVLVSGPRKMRHAVASICTSCSTDDIHFESISFSW. 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07350 1148 FunFam Ferric reduction oxidase 5 441 550 - -
Seca8g07350 1148 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 761 868 IPR017927 GO:0016491
Seca8g07350 1148 Pfam Ferric reductase NAD binding domain 869 1131 IPR013121 GO:0016491
Seca8g07350 1148 Pfam Ferric reductase NAD binding domain 270 535 IPR013121 GO:0016491
Seca8g07350 1148 FunFam Ferric reduction oxidase 3 858 975 - -
Seca8g07350 1148 CDD NOX_Duox_like_FAD_NADP 224 347 - -
Seca8g07350 1148 PANTHER NADPH OXIDASE 567 1146 - -
Seca8g07350 1148 Gene3D - 1034 1148 IPR039261 -
Seca8g07350 1148 Gene3D - 462 551 IPR039261 -
Seca8g07350 1148 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 871 1143 IPR039261 -
Seca8g07350 1148 FunFam Ferric reduction oxidase 3 259 377 - -
Seca8g07350 1148 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 271 546 IPR039261 -
Seca8g07350 1148 CDD NOX_Duox_like_FAD_NADP 790 946 - -
Seca8g07350 1148 Pfam FAD-binding domain 787 863 IPR013112 GO:0016491
Seca8g07350 1148 SFLD Ferric Reductase Domain 4 222 - -
Seca8g07350 1148 SFLD Ferric Reductase Domain 224 550 - -
Seca8g07350 1148 SFLD Ferric Reductase Domain 558 1148 - -
Seca8g07350 1148 Pfam Ferric reductase like transmembrane component 59 177 IPR013130 -
Seca8g07350 1148 Pfam Ferric reductase like transmembrane component 627 748 IPR013130 -
Seca8g07350 1148 Gene3D - 254 383 IPR039261 -
Seca8g07350 1148 Gene3D - 853 981 IPR039261 -
Seca8g07350 1148 PRINTS Cytochrome B-245 heavy chain signature 161 181 IPR000778 GO:0016020|GO:0016491
Seca8g07350 1148 PRINTS Cytochrome B-245 heavy chain signature 136 159 IPR000778 GO:0016020|GO:0016491
Seca8g07350 1148 PRINTS Cytochrome B-245 heavy chain signature 512 530 IPR000778 GO:0016020|GO:0016491
Seca8g07350 1148 SFLD Ferric reductase subgroup (FRE) 559 1148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07350 Seca-Chr8 170235565 170247484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07350 1 550 Miscellaneous Gene Families AT5G23980 57.309 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07350 K00521 - gmx:100779692 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07350 8 170235565 170247484 Seca8g07350 8 170235565 170247484 ECH