Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07338 ATGGCTTCCACCAACAAAGACAAAACCAGCACCAACGAAACCACACACACCGTTTCTTCTTCTCCAGTCTTCATATCCACCGAGACCTTATGCACCATCCTCACCCATCGAACTCTCATGAATCACTTCCAATCCACTCTCCCCAAAGTCTCAACCTTTCTCCAAACCCCAATTCGCCAACACTACGATGTCTCTCCTTCCTCCTCCCTCCTCCTCATGCCCTCTTGGTCCTCTTCCCCTTCTTTCCCTTACATCGGCGTCAAGCTTGTCACCCATTTCCCTCAAAACTCTGCACTCAACTTACCAGGTGTGCAGGGAAGCTATGTCCTCTTCAGTTCCACAAATGGCCAAACTCTTGCTTCCATGGATTCCACTGAACTCACCCTTTACCGAACCTCGTGTGTCTCTGGCTTGGCTTCCAAATATTTAGCGAGAGATGACAGTGAGGTCCTTGTTATGGTTGGGGCTGGTGCCCTAGCACCCCATTTGATCAAAGCTCATCTTTCAGCCATACCCAGTTTGAGAAAAGTCATAATCTGGAACAGAACAGTAGAAAAGGCGAAAACTTTGGCCCAGAAATTGCAAGAAAGTGATGAATTTGCAGGATTGAGCTTTGAGGGTTGTGGGTGTTTGGATGAGGTTGTTGGACTTGGGGACATTGTGAGCTGTGCTACCAATTCTGAGGCACCACTTGTGAAAGGTGAGAGATTGAAGGCTGGAGCTCATTTGGATTTGGTGGGTTCCTTCAAGCCTTCAATGAAGGAATGTGATGATGAGGCCATAAGAAGGGGAAAGATGTTCGTGGACAATGAAGCTGCACTGGTAGAAGCAGGGGAGCTGGTGGGTGCTTTTGACAGAGGAGTAATCAAGAAAGATGAAATTGGAGGAAATTTGGTGGAACTTGTTAGAGGTGACAAGGTTGGGAGAAGCAGTTCAGAGCAAATAACTGTTTTCAAGTCTGTTGGTTCTGCTGTAGTGGATATGCTGGCAGCACAATTTGTTTATAAGACTTACACAAGGAGCTAG 1026 0.4698 MASTNKDKTSTNETTHTVSSSPVFISTETLCTILTHRTLMNHFQSTLPKVSTFLQTPIRQHYDVSPSSSLLLMPSWSSSPSFPYIGVKLVTHFPQNSALNLPGVQGSYVLFSSTNGQTLASMDSTELTLYRTSCVSGLASKYLARDDSEVLVMVGAGALAPHLIKAHLSAIPSLRKVIIWNRTVEKAKTLAQKLQESDEFAGLSFEGCGCLDEVVGLGDIVSCATNSEAPLVKGERLKAGAHLDLVGSFKPSMKECDDEAIRRGKMFVDNEAALVEAGELVGAFDRGVIKKDEIGGNLVELVRGDKVGRSSSEQITVFKSVGSAVVDMLAAQFVYKTYTRS. 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07338 341 PIRSF CryM 15 341 IPR003462 -
Seca8g07338 341 Gene3D ornithine cyclodeaminase, domain 1 54 335 IPR023401 -
Seca8g07338 341 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 338 IPR036291 -
Seca8g07338 341 FunFam Protein SAR DEFICIENT 4 49 156 - -
Seca8g07338 341 Pfam Ornithine cyclodeaminase/mu-crystallin family 39 337 IPR003462 -
Seca8g07338 341 FunFam Ornithine cyclodeaminase 145 322 - -
Seca8g07338 341 PANTHER KETIMINE REDUCTASE MU-CRYSTALLIN 23 339 IPR003462 -
Seca8g07338 341 Gene3D - 145 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07338 Seca-Chr8 170093454 170094479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07338 - - gmx:100804363 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07338 8 170093454 170094479 Seca8g07338 8 170093454 170094479 ECH