Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07329 ATGGTGTCTAATTCTAGAATACAGACTCAAAGTGCTGTGTCAGCAGTCCATTTCCTCCTTCAGAGTGTAGAAGCCGCACTACCAAAACAGAAAAGGAATATGGCTGTAACAGAATTTAAGCATGCAATGGTTGCCCATAAAAGGCGCTGTAAAGCTCACCAGGTGGAAAAAGGTTCATTTCAACTGCCACAAGATATTCTTGTACACATTTTCAGTTTTCTAGATATGCAATCTTTGGTCTCAGTGGTGCTAGTCTGTTGGTCATGGAACTTAGCAGCAAATGATAACCGTCTGTGGGAGTTGCAGTATGTTGTACTGTTTGGTAGTGCTGCTAAACAGCAATCCATGAGACTGGTTGAAGACAGGAACAATAGGCTTTTGCAGAAACCTGAAGATACTAGAACCATTACTGACTGGAAAGAGGCTGTTAAAGGAGCATATACTGGAGCATTATCCAAGAAATTAACAACCAATCGGGGATACTGTGTACACTGTAAAACTGTAGTTTGGCTAAACAACTTAAAATGTCCCAATGTACATTGTGGAATGATATCTGAAACTCAAGATATCAAGCCTGTAACAGCATTCCAGGTATATTCTGTACTGTATAGCCACTTTGTATCAGGTCATTTATCATAG 639 0.4006 MVSNSRIQTQSAVSAVHFLLQSVEAALPKQKRNMAVTEFKHAMVAHKRRCKAHQVEKGSFQLPQDILVHIFSFLDMQSLVSVVLVCWSWNLAANDNRLWELQYVVLFGSAAKQQSMRLVEDRNNRLLQKPEDTRTITDWKEAVKGAYTGALSKKLTTNRGYCVHCKTVVWLNNLKCPNVHCGMISETQDIKPVTAFQVYSVLYSHFVSGHLS. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07329 212 CDD F-box_SF 61 94 - -
Seca8g07329 212 Gene3D - 40 100 - -
Seca8g07329 212 Pfam F-box-like 61 100 IPR001810 GO:0005515
Seca8g07329 212 PANTHER OS05G0526300 PROTEIN 6 202 - -
Seca8g07329 212 SMART fbox_2 62 102 IPR001810 GO:0005515
Seca8g07329 212 SUPERFAMILY F-box domain 61 139 IPR036047 GO:0005515
Seca8g07329 212 ProSiteProfiles F-box domain profile. 56 102 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07329 Seca-Chr8 170011619 170015514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07329 - - gmx:100789652 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07329 8 170011619 170015514 Seca8g07329 8 170011619 170015514 ECH