Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07322 ATGGATACGGAAGGGTTATCCCTAATCTGTGCCGGCCTCGGAACTATCGAAGAAGATGACCAAGGCAACCGAATCGGTTACTCTAAGGGGGAACACTGTCTAGATAACCTGAAAGACTTGCTGAGGTTTCTGAGGCGCGACGACCCGCAAACGCGCGATGTGTTCAAACAAGTGTGCAAATGGAACATCGTTTCCAAGGATTTGATACCAATCATCGAGCACCACCACGGAGATCGCAACTTGCTTTTGAATGCAGTGAAGGTTTTGGTGTTCCTTACTATGCCACTTGAGCCTGGTTCGACCGATATCTCTCAGCAGTTGGAGTATCTGTGGGGTTTGAAGTCTGCAGTGACGTGCAGTGATGTCGCTGCGGTGATAGTGTCGTTTCTTGAAAGACCTCTTGAGAATTTGGAGCGTGGTGGGTTCACCGAGGATGACTGGAAATTGGTACAGCTAGTGCTTACATTATTCAGAAATATCCTAGCCATTCAAGAAATCCCGTTGCATGAGAAGGCAGGGGGATTTGTTGGTCATTATTTGTCGATAAGAGATAGATTTTTGGAACTTTTGTTTCACGAGAATGTAATGGATATAATCTTGGTTATATCTCACTATGTTGGTGGTTCTAATGTTTATCTCCGTCAGGATAACTTGCTTCTACTGGATATTATCCATTACATTTTTCTGGGTCAGGACCCGGAGTTGATTGTTAGGGCCCATTTGAATGGATTAAAGGAGAATGAAGACTCCCGAGCTTCCCTTGATAGTCTCCAGTCCATTATGGAGGAAGAAAAGAAGAAAAGGGCTATTTGTAGGCTTGGCAATATAAGTCGTCACTCACAATTTAGTGGAACATTTGCACGCCTTACCACGGATGGTTCTAAGGCAGTAGTTAAGGGAAATCCTAATTCTTCTCATAATATGCTGCTGCTTAAATCACAAAATGTCACTCGGGGTCCTGCCAAAAAAATTGCATGGGATCATCCAAGGTTGCCTTCAACAAAGGATAAGATATTGGAGTTGCTTCATGGATTTGTGAATCAGTTTCTGTCTGGGGGATACAATGTTTTGATGCGATCCATCTGTGAAGACATTGAAAAGGAACATCCTGCAATTCAAAAAAGCGATGTTGTTGTTTTCTTTCAAGTGGCTGAATTTGTCACTTCATTTCAGTTTTTCACGTATTCAGCTTCTAAGACTAAGGAGAGAGGGGACACATTTGACACTTTTGGTGATAGAGATGCTCATACCTCAGATTTCAGTGGCCAAATATGTGGCCCAATTGCGGCATCCTTGAATGAATCAATGTTTCAATTAGTCATATCAAAGTGGCGGCATGCCTATGATGGTCTAAAGGAGACAAATGACTACAAGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATTTGGTACTTAAATTGTTACCAGAAGACTCTAAGGAGCCACAAACAGCTCGCATCCTTCTGTACAAGTTATTTTATGATCAGACTGAGGAAGGGATGACACAATTCCTCTTGAATTTGATGAAAACCTTCGACACCCACAAACAATGCAAAAGTGATCTTGCAGATTTGGTTGAAATCTTTTACAAGGTTGTACAGCTAATGGATAATCTTCAGTCTCGAGGAACATTGAGGGTGTCAAAAAAATCTAGGAAAGTGAAAAAGAAGAAAATTTCCGAAGGAACAGAATCAGGGAATAAACCAACTGGAGAATCTTGCATTCAAAATGAAGATGACATCTGTATTGGTAATAAATTAGCTGAAAATCAGTCACTGCAGAAGGAATACCTATCGAAAGCAAAATCCTCTGGGGACGAAGACGTTGTCCCTGATGATAATGAACATGAAAATGTTGAGGAAGATGGGAACTCCGAAGTTGGTTTGGAACCAATGGAAAACAAAAATCCTGAACATCCTAACGAGGATGTGTTGGATGGCACTGGTGATTTTTCTGAAGACGAGCAATTAAATGCAATTAGTGAAGTTGATTTCAGAGTTTCAACATTGGTCTCTGCCTTAGCAAATCACAATATCATTCAGAAACTATGTTGGTTACTCAAGTTTTACAAGAGCAATTCCCCTGCTATAAATCATTACATAATAAGTTTGTTGCGGAGAATAAGTGATGACCTTGAACTGCATCCAATGCTCTACCAGTTGTCGCTGCTCACGACTTTTTATGACATCCTGGTTGAACAAAAGTCATGTCCCTGCGAGGAATATGCAGGTATAGTTGATTTCCTGACCAGTTTGGTCAGAAAGATGCTAAAGAAAATGAAAAAGCAACCCCTTCTGTTTGTGGAAGTCCTTTTTTGGAAGACTCGAAGGGAATGCCATTACATCAATGCGGAATACCTGTTGGATGAGCTTGGTCATTTGAAGAAAGAAAGTACAAATTGGAATAATACTCAAGGAGATGGAGAAATTGGTTCATCCCCAGTAAAGCCGTGGACTCGTAGAAGCATAGCTGATGCACTCGGTGATGATGAAGCTGATGTTGTGATCTCTCATGACTTGGGATATGACAAGTATGAAGAAAAGATTGATGATGTTATAGAAGGCATTGCATCTACCTCAGGCAAAGATAATAATGAGTATGATAACAGTGGGGAGAAATTAATGGAAGATGATTCTCAAATAGCTCCAAGGAGAAAGAAGAGGCTTATTTTGAATGCTGAATTGGAGAGACAAATTAAGGATCTCTATGAAAAATTTAAAGATGATCGAAATTGCAGTCGATGTATTGCTGAAGTGCTAGATCCAGATGGTAAAATTTCACCGGCTCAAATTTCCAACAAATTAAAAAAATTAGGGCTAACAGTTGCACCTAGGCAAAAGGTGGGTGATACTGCTGAATCTTTTTCAACTAGCCCTAATCAATTAGAGGGTGAAGGAATAGCAGTTGCTAATCATAAATCAGTGAATTTGGAGGGAACCCTGTTGGTTCAGCATCTGCAGAAAAGAAAGAGAGTCTGTGCTTTCAATGAAGATCAGGAAGCTCTGATCAAAGTTCTATATGAGCAATTCAAGGACCATAGAAGATGTAGTTCCATGATAGCCAATGCACTGGATGTGGATGGTAAATTCACACCTGCTCAAGTCTCTCGAAAACTTAAGCAGCTTGGCTTATATGTTCCTCAGAAAAGTTTTAGAGGCAAAATGCACCGAAAGGGTGAGGATCTTATGGAGTGTTCAAAAGATAGAATAAATGAATCCGATGATGAGACTTTGATATCATTGATAGAAAGAAAAAAAATGGAGAGTAGCAAAGTATCAAACGAACAGTTACATGAACAGACCAGTGGGGATAGATTGTCAAAAGATGATTCTGATGATGAAATACTCAGCTCTGTTCTCAAGAAAAAAATGAAGAATAACAAAGTATCAAGTGAACAATTACATGAGCACACCGATGAGGATAAATTGTCAAGAGATGATTCTGATGATGAAATGCTCAGCTCTGCTCTCAAGCGAACTAGGAAATCCCTTAAGTCGAAGCATGGTGAGTTGGAAACCATCGAAATTCAGGAGAGAATGATGGACAATGATTCTCTTAATGATGGCATAAAACAGGTTTCGGAAAGTGAAAATCGGGCAGGTTTCATGAACTCCCACCAAGTAGAATATCAGGAAGTGGATCATGACTTGGTAGATTCAGAGGATGAAGTGTCTGTCAGTGCATTTCCTGACAATGCTGTATCCAGAAGGAAGCTGAGAATGGTGATTGATCCCGAGGATGATGACTGA 3768 0.4039 MDTEGLSLICAGLGTIEEDDQGNRIGYSKGEHCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNIVSKDLIPIIEHHHGDRNLLLNAVKVLVFLTMPLEPGSTDISQQLEYLWGLKSAVTCSDVAAVIVSFLERPLENLERGGFTEDDWKLVQLVLTLFRNILAIQEIPLHEKAGGFVGHYLSIRDRFLELLFHENVMDIILVISHYVGGSNVYLRQDNLLLLDIIHYIFLGQDPELIVRAHLNGLKENEDSRASLDSLQSIMEEEKKKRAICRLGNISRHSQFSGTFARLTTDGSKAVVKGNPNSSHNMLLLKSQNVTRGPAKKIAWDHPRLPSTKDKILELLHGFVNQFLSGGYNVLMRSICEDIEKEHPAIQKSDVVVFFQVAEFVTSFQFFTYSASKTKERGDTFDTFGDRDAHTSDFSGQICGPIAASLNESMFQLVISKWRHAYDGLKETNDYKFLSAAGSLLKNMIRMLDLVLKLLPEDSKEPQTARILLYKLFYDQTEEGMTQFLLNLMKTFDTHKQCKSDLADLVEIFYKVVQLMDNLQSRGTLRVSKKSRKVKKKKISEGTESGNKPTGESCIQNEDDICIGNKLAENQSLQKEYLSKAKSSGDEDVVPDDNEHENVEEDGNSEVGLEPMENKNPEHPNEDVLDGTGDFSEDEQLNAISEVDFRVSTLVSALANHNIIQKLCWLLKFYKSNSPAINHYIISLLRRISDDLELHPMLYQLSLLTTFYDILVEQKSCPCEEYAGIVDFLTSLVRKMLKKMKKQPLLFVEVLFWKTRRECHYINAEYLLDELGHLKKESTNWNNTQGDGEIGSSPVKPWTRRSIADALGDDEADVVISHDLGYDKYEEKIDDVIEGIASTSGKDNNEYDNSGEKLMEDDSQIAPRRKKRLILNAELERQIKDLYEKFKDDRNCSRCIAEVLDPDGKISPAQISNKLKKLGLTVAPRQKVGDTAESFSTSPNQLEGEGIAVANHKSVNLEGTLLVQHLQKRKRVCAFNEDQEALIKVLYEQFKDHRRCSSMIANALDVDGKFTPAQVSRKLKQLGLYVPQKSFRGKMHRKGEDLMECSKDRINESDDETLISLIERKKMESSKVSNEQLHEQTSGDRLSKDDSDDEILSSVLKKKMKNNKVSSEQLHEHTDEDKLSRDDSDDEMLSSALKRTRKSLKSKHGELETIEIQERMMDNDSLNDGIKQVSESENRAGFMNSHQVEYQEVDHDLVDSEDEVSVSAFPDNAVSRRKLRMVIDPEDDD. 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07322 1255 MobiDBLite consensus disorder prediction 1107 1159 - -
Seca8g07322 1255 PANTHER TIMEOUT/TIMELESS-2 1 1255 IPR044998 -
Seca8g07322 1255 MobiDBLite consensus disorder prediction 559 581 - -
Seca8g07322 1255 MobiDBLite consensus disorder prediction 603 645 - -
Seca8g07322 1255 Pfam Timeless protein 27 287 IPR006906 -
Seca8g07322 1255 Coils Coil 247 267 - -
Seca8g07322 1255 MobiDBLite consensus disorder prediction 1093 1159 - -
Seca8g07322 1255 MobiDBLite consensus disorder prediction 616 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07322 Seca-Chr8 169882997 169897181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07322 K10997 - gmx:100796385 1883.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07322 8 169882997 169897181 Seca8g07322 8 169882997 169897181 ECH