Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07280 ATGATCACGAGACGAATACACCATCATTTTCAGTCCACCGCGTCTCCACAAGCAGAATGGCTTCTCCGATCGTTTTGTCTGTGGTCGATGAAGAAGGACCCGGAGTTGGAATCGGCGCTGTCTCGCAATCGTCGGTGGATCGTGAACAACCAGATCAAGAACATTATCCTCCGCTACCCTAACAACGAGATTCCAATTGAAACCCTCCAGAAGAAGTTCAAAACCCTCGATCTCCAAGGCAAAGCCCTCAACTGGGTCTCCAAGTACCCTTGCTGCTTCGAGGTCCACGAACGCCGTTGCCGCCTCACCAAGCGCATGATGAGCCTCGTCCACGAGGAACAATCCCTCAAGGACTCTCTCGAACCCATCTTTGTTCGCCGTTTGGCCAAACTCTTAATGTTGTCCCTCAACAACAGGCTCAACGTCCTCAAAATCAATGAATTAAAACGCAATTTCGGGTTCCCCGATGATTACTTGATTAGGATTGTGCCTAAATATCCCGATTTGTTCCGAATTGTGAACGAGAGTGGGAGGAGGAGTTCCATGGTGGTTGAGTTGGTGAATTGGAACCCTGAATTTGCTGTTTCCGCTGTTGAAGCTTTGGCTCGGAAGCACGGCACTAAGCCTTGCTTTTCATGTTCTTTGCCTTCCAGTTGGGTGAAATCGTGGGAGAGGTTTCACCAATTTGATTCGATTCCTTATGTATCGCCTTACACGGATCCTAGAGGTTTGGTGGAGGGATCTAAGGAGATGGAGAAGAGGAATGTGGGTTTGGTGCATGAGTTGTTGTCATTGACACTTTGGAAGAAGGCCTCAATTGTGAAGTTGGGTCATTTTAGAAGGGAGTTTCTTTTGCCAGATAGGTTGAATGTCTTGTTGCTCAAGCACCCTGGCATATTCTATGTTTCCAATAAGTATAAGATTTACACTGTTCTCCTTAGAGAGGCATATGTTGGGTCTCAACTTGTGGACAAGGATCCTTTGGTGGTTGTGAAGGAGAAATTTGGGGAACTGATGCAGGAGGGACTTCATGAGTACAATCAAAATCGGCGCCTCATCAATCTAGAAAAGAGGAGAAAGAAAGGTGTTCCTTTGGCTAGAGTGAACGAAATAAAGGGTGGAAGAAGGAGAAGTCATGAAAATTCTGACTCTGATGAGGATGGAAATAATAGTAAGATGGGAGGGTTGCTTGACCCGGAAGAAAGAAAACGGTTTTATAAAGTTCTGTTTGATGATGATGGTTCATGA 1248 0.4599 MITRRIHHHFQSTASPQAEWLLRSFCLWSMKKDPELESALSRNRRWIVNNQIKNIILRYPNNEIPIETLQKKFKTLDLQGKALNWVSKYPCCFEVHERRCRLTKRMMSLVHEEQSLKDSLEPIFVRRLAKLLMLSLNNRLNVLKINELKRNFGFPDDYLIRIVPKYPDLFRIVNESGRRSSMVVELVNWNPEFAVSAVEALARKHGTKPCFSCSLPSSWVKSWERFHQFDSIPYVSPYTDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKASIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKYKIYTVLLREAYVGSQLVDKDPLVVVKEKFGELMQEGLHEYNQNRRLINLEKRRKKGVPLARVNEIKGGRRRSHENSDSDEDGNNSKMGGLLDPEERKRFYKVLFDDDGS. 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07280 415 MobiDBLite consensus disorder prediction 366 399 - -
Seca8g07280 415 Pfam Plant organelle RNA recognition domain 31 342 IPR021099 GO:0003723
Seca8g07280 415 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 27 378 IPR045040 GO:0003723
Seca8g07280 415 MobiDBLite consensus disorder prediction 366 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07280 Seca-Chr8 169260252 169263061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07280 - - gmx:100814115 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07280 8 169260252 169263061 Seca8g07280 8 169260252 169263061 ECH