Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07195 ATGCCTCTGATTCTGAAGAACAATAACAATAATGCCCTTTTCTCTGTTCCCACACTTTACCTCTTGTTCACCCTCCTCTCCCTTCTCTCTCTCGCTTTCTTCTGCTTCTTCTCCACCACCACCTCCTCCTCACACACTTCTCTCTCTCTTCAATCTTCCACCAATTCCGGCATCAACGTTTACGTGGCGGAGCTTCCCAGATCACTGAACTACGGCCTCCTTAACCGCTACTGGTCCTTTGATGGCGATACCCGACTCGGCAGCGACTCAGATAGAGAGATTCGATCCAGCGATTTGGGCAAAACCCTAGAATTCCCACCTTACCCTGAGAACCCACTGATCAAGCAGTATAGCGCGGAGTACTGGATCATGGGGGATCTGATGACCCCTCCCCAACTGCGAACTGGGTCTTTCGCAAAACGGGTTCTTGATGCACGTGACGCCGACGTGATCTTCGTTCCCTTTTTTGCTACTCTCAGCGCTGAAATGCAACTGGGTATGGCGAAAGGTGCGTTCAGGAAGAAGGTTGGGAACGAGGATTATCAGAGGCAGAGGGAGGTCATGGATTCTCTCAAGAAAACACAAGCTTGGAAGCGTTCTGGTGGCCGAGATCACGTGTTTGTGCTCACTGGTATGATTTCTGTGCTTGCAAGTAGCTATTGGTAG 666 0.5045 MPLILKNNNNNALFSVPTLYLLFTLLSLLSLAFFCFFSTTTSSSHTSLSLQSSTNSGINVYVAELPRSLNYGLLNRYWSFDGDTRLGSDSDREIRSSDLGKTLEFPPYPENPLIKQYSAEYWIMGDLMTPPQLRTGSFAKRVLDARDADVIFVPFFATLSAEMQLGMAKGAFRKKVGNEDYQRQREVMDSLKKTQAWKRSGGRDHVFVLTGMISVLASSYW. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07195 221 Pfam Exostosin family 55 210 IPR040911 -
Seca8g07195 221 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 45 211 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07195 Seca-Chr8 168277351 168278016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07195 - - adu:107467786 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07195 8 168277351 168278016 Seca8g07195 8 168277351 168278016 ECH