Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07167 ATGGGCGACAAAAGAAAGAAGCACCGTCGTCTACCCGACTCACCCTCTTCCTCTCCTTCATCCTCTCCCTCCACCGCCTCTCATTCCTCCGACTCCGACTCCGACTCCGACCGCTCTTCTAGGCGCCGCCGCCACCGCCGGGAAAAGGAGCGGCGCAGAAGGAGCGAAGGAAGCTCCAAGCGGGAAAGGGAGAGCAGGAGAAGGGAAAAGCGGAAGAAGAAGAAGAGAGACAGAGAGAGGAAGAAGACCAAGCGAGTCCACGATTCTGATGGCTCCCAATCTTCGGACGAGGAAGACGAACTCAGGGTTCAGCCTCAAACTGTGGTGCATCAAATGATGACCGAGTTCCCCAATGTTGGCAACGATTTGAAGCAGCTCTTGCAAATGATTGATGATGGACAAGCTGTTGACATAAAGGGTATATCAGAAAGAGCTCTAATGAAGCATCTCAAGAAGCTTTTCCTTTCGTTAAATCTTAAGGAAAATGGGGATAGAGTTTTCTTACTGCCTTCTAAAGCACGCCCTACTTTGGATGTTCTTGGACCTCTAATTTACTCTTATATGCATCCCGTGGATGAGCAAGCTGATCCTTCAGCAGCAGTGCCTGAAACAGTTCCAATAGATAAGGAGAATGAACAAATGGTAGATAACCATATAACAGCAACTCCAGATGATAATTCTCTTGGTCCTAGAAGAAGGGTGATTGGCCCTGCAATGCCGTCAGCTGAATTACTTGCTGCTGCCGCCAAATTAACAGAGGCACAGACTGAGCTCAGAGATGCTGAATTGGACGGCGATGATGAACTATTTATAGGACCTCCACCTCCTGCTATAGTTTCTGAAGCAGAATCAGCTAATGAAGCAGAACGTTTTGAAGAGGTCACCAGGATCATGGAGGTTGAGACTGACAGCCCATACGATGTTGTAGGAGTTAACCATAATATGTCCAGTGATAACATAAAGAAAAAGTACTGGAAGATGTCACTATTGGTTCATCCAGATAAATGCTCTCATCCACAAGCCCACCAAGCATTTATTAAGTTAAATAAAGCTTTCAAAGAGTTACAAGATCCAGAAAAGCGGAAAGCAATGGATGAGAAAATCAAACTCAAGCAAGAACAGGAGGATATGAAGGCTGAACTTAAATCCATGCGTGAGGCTGCATTGTGGAGAAGATCCCAAGGTATATCCATGGAGGGTGATGATGAGCTTCTGGCACAGACAGAGGTTAAAGTGGAACCAAAAAGAGATGAATGGATGACAACACTGCCTCCAGAGAGGAAACCTGGTGGTATGACTATGCAATCAACCAAGTTTAGCCGGGGCTCAAAGGAAGGTAGAGGTGATACTAGTGTTTGGACAGACACCCCTTCTGACAGAGCCCAGAAAGCAAAGATGAATTATTTGGAAGCATACAATGAGGCTACTGCACTAGCCTCAAATGAAGAGGAGAAGAAAAGGGCTAATGCGGATGCAGATTTGGTGGACAAATACAATAAAGCAAAACGATCAAAAACACTGATGCAAAAGCATCAAGAAGAGGTTGGCAGCAAATCCAAGAAAAAGTCCAAGCAACAGCCGGAGAAGGAAGATTGGGTGGGTCAACATCCATGGAAGCCATGGGACCGTGAAAAGGATCTGACAGCTGGGAGGAAAAGTGTAAAACTTGATGCTGAAAGCATGACTCAGGGCTTATCTTCAAGGTTTTCTTCTGGAAACTTTCAGAGGAACTTCCTTTGA 1740 0.4586 MGDKRKKHRRLPDSPSSSPSSSPSTASHSSDSDSDSDRSSRRRRHRREKERRRRSEGSSKRERESRRREKRKKKKRDRERKKTKRVHDSDGSQSSDEEDELRVQPQTVVHQMMTEFPNVGNDLKQLLQMIDDGQAVDIKGISERALMKHLKKLFLSLNLKENGDRVFLLPSKARPTLDVLGPLIYSYMHPVDEQADPSAAVPETVPIDKENEQMVDNHITATPDDNSLGPRRRVIGPAMPSAELLAAAAKLTEAQTELRDAELDGDDELFIGPPPPAIVSEAESANEAERFEEVTRIMEVETDSPYDVVGVNHNMSSDNIKKKYWKMSLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDEKIKLKQEQEDMKAELKSMREAALWRRSQGISMEGDDELLAQTEVKVEPKRDEWMTTLPPERKPGGMTMQSTKFSRGSKEGRGDTSVWTDTPSDRAQKAKMNYLEAYNEATALASNEEEKKRANADADLVDKYNKAKRSKTLMQKHQEEVGSKSKKKSKQQPEKEDWVGQHPWKPWDREKDLTAGRKSVKLDAESMTQGLSSRFSSGNFQRNFL. 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07167 579 Gene3D DnaJ domain 287 388 IPR036869 -
Seca8g07167 579 MobiDBLite consensus disorder prediction 480 553 - -
Seca8g07167 579 MobiDBLite consensus disorder prediction 83 103 - -
Seca8g07167 579 PRINTS DnaJ domain signature 324 339 IPR001623 -
Seca8g07167 579 PRINTS DnaJ domain signature 306 324 IPR001623 -
Seca8g07167 579 PRINTS DnaJ domain signature 340 360 IPR001623 -
Seca8g07167 579 Pfam Protein of unknown function (DUF3752) 424 570 IPR022226 -
Seca8g07167 579 MobiDBLite consensus disorder prediction 1 103 - -
Seca8g07167 579 CDD DnaJ 305 357 IPR001623 -
Seca8g07167 579 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 4 579 - -
Seca8g07167 579 MobiDBLite consensus disorder prediction 14 30 - -
Seca8g07167 579 MobiDBLite consensus disorder prediction 420 461 - -
Seca8g07167 579 Pfam DnaJ domain 305 365 IPR001623 -
Seca8g07167 579 MobiDBLite consensus disorder prediction 480 579 - -
Seca8g07167 579 Coils Coil 360 387 - -
Seca8g07167 579 Coils Coil 244 264 - -
Seca8g07167 579 MobiDBLite consensus disorder prediction 559 579 - -
Seca8g07167 579 ProSiteProfiles dnaJ domain profile. 304 368 IPR001623 -
Seca8g07167 579 SMART dnaj_3 303 360 IPR001623 -
Seca8g07167 579 MobiDBLite consensus disorder prediction 433 461 - -
Seca8g07167 579 SUPERFAMILY Chaperone J-domain 278 362 IPR036869 -
Seca8g07167 579 MobiDBLite consensus disorder prediction 65 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07167 Seca-Chr8 167893468 167910226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07167 - - gmx:100788598 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07167 8 167893468 167910226 Seca8g07167 8 167893468 167910226 ECH