Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07153 ATGGCTCACCTTCTCCAAAGTCCCTTCCTCCCTTCAACCTGCGCCCTCCGTCGCAGCCCCATTCTCCATCGGAGAACGACATCCTCTATTGTCGTTCGGGCCAAGATCCGCGAAATTTTCATGCCGGCCCTTAGCTCCACCATGACCGAGGGCAAAATCGTCTCATGGATCAAGTCCGAAGGCGATAAGCTCTCCAAGGGTGACAGTGTCGTCGTCGTTGAATCTGACAAGGCCGACATGGACGTCGAGACCTTCTACGACGGATACCTCGCCGCCATCGTCGTCCAAGAAGGCGATGTCGCCACCGTCGGATCTCCCATCGCATTCCTCGCCGAATCCGAAGACGAAATTTCTGAGGCTAAGTCCAAACTCCTCTCTTCTTCTCCTTCTTCCTCACCTGCACCTCCTGTAGAATCTCAACCTGAGAAGGTTGCGGAGAATGCGGTGCCTGTTTCAGCGGCGAAGGTGGCTCCGGCGGTGGTTGCGTCAAGGCATCCAGCGTCGGAGGGAGGGAAGAGAGTGGTGGCGTCTCCTTATGCGAAGAAGCTGGCGAAGGAGTTGAAGGTGGAATTGGAGAGAATCGTGGGGACTGGACCCTTGGGGAGGATTGTGGCTAAGGATGTTGAGGCATTTGCAGCATCTGCGGGAGCTTCCTCCGGGACTGTTGCGGCGGAGCCGGCGAAGAGTGCGGCTTCCGGGGTCGAGTTGGGGTCTGTGGTGCCTTTCACCACAATGCAGAGTGCTGTGAGTAGGAATATGGTGGATAGTTTGGCGGTTCCCACTTTCAGAGTTGGTTACACCATCACCACTGATGCACTTGATGCTCTGTACAAGAAGATCAAGTCAAAGGGGGTTACTATGACAGCGTTGCTTGCCAAGGCTACAGCACTTGCCCTGGTTAAACACCCTGTTATAAACTCCAGTTGTAGAGATGGTAATAGCTTTACATATAATAGCAGCATCAACATTGCAGTAGCTGTGGCTACAGATGGCGGACTGATTACACCAGTGCTTCAGGATGCTGATAAGGTTGATGTCTATTCATTGTCAAGAAAGTGGAAGGAACTGGTTGATAAGGCCCGAGCCAAGCAACTGCAACCTCATGAATACAACACAGGTACTTTCACTCTTTCCAACCTGGGAATGTTTGGTGTTGATCGCTTTGATGCTATTCTGCCACCTGGAACTGGAGCAATAATGGCTGTTGGAACATCACAGCCAACTGTTGTGGCTACCAAGGATGGTCGCATTGGCATGAAGAACCAAATGCAGGTCAATGTTACAGCAGATCATCGAGTAATCTATGGTGCTGATCTTGCTTCATTCTTGCAAACCTTGTCGCAGATTATTGAGGATCCTAAAGATCTTACTTTCTAG 1377 0.5149 MAHLLQSPFLPSTCALRRSPILHRRTTSSIVVRAKIREIFMPALSSTMTEGKIVSWIKSEGDKLSKGDSVVVVESDKADMDVETFYDGYLAAIVVQEGDVATVGSPIAFLAESEDEISEAKSKLLSSSPSSSPAPPVESQPEKVAENAVPVSAAKVAPAVVASRHPASEGGKRVVASPYAKKLAKELKVELERIVGTGPLGRIVAKDVEAFAASAGASSGTVAAEPAKSAASGVELGSVVPFTTMQSAVSRNMVDSLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVKHPVINSSCRDGNSFTYNSSINIAVAVATDGGLITPVLQDADKVDVYSLSRKWKELVDKARAKQLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGTSQPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLSQIIEDPKDLTF. 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07153 458 SUPERFAMILY CoA-dependent acyltransferases 227 453 - -
Seca8g07153 458 Gene3D - 162 215 IPR036625 GO:0016746
Seca8g07153 458 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 32 135 - -
Seca8g07153 458 SUPERFAMILY Single hybrid motif 35 127 IPR011053 -
Seca8g07153 458 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 239 456 IPR001078 GO:0016746
Seca8g07153 458 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 169 216 - -
Seca8g07153 458 Pfam Biotin-requiring enzyme 38 108 IPR000089 -
Seca8g07153 458 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 175 212 IPR004167 GO:0016746
Seca8g07153 458 ProSiteProfiles Biotinyl/lipoyl domain profile. 36 111 IPR000089 -
Seca8g07153 458 MobiDBLite consensus disorder prediction 120 146 - -
Seca8g07153 458 Gene3D - 32 135 - -
Seca8g07153 458 Gene3D - 228 457 IPR023213 -
Seca8g07153 458 Pfam e3 binding domain 174 209 IPR004167 GO:0016746
Seca8g07153 458 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 27 457 IPR045257 GO:0006086|GO:0045254
Seca8g07153 458 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 61 90 IPR003016 -
Seca8g07153 458 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 234 457 - -
Seca8g07153 458 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 167 213 IPR036625 GO:0016746
Seca8g07153 458 CDD lipoyl_domain 38 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07153 Seca-Chr8 167758920 167764698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07153 1 458 Acyl Lipid Metabolism Gene Families AT1G34430 75.476 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07153 K00627 - gmx:100799926 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07153 8 167758920 167764698 Seca8g07153 8 167758920 167764698 ECH