Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06772 ATGGATGTTATTTGCTTTGATGACAACAAAGAAGGAATGGAACTGAAATCTGGCGTGGGGTTCCCTACTTCAGATTTGTCTGACATGGATGATAATTTTGGAGATCCACAAGTGCTTCCTCGGGTTGGAGATCAGTACCAGGCAGAGATCCCTTCATTAATTGCAGCACCTTTTCTTTCTCAGGTTACAAAGAACTTAAGAGATTCAGATATGCTAGAGTCTTTTCCACCGGGATTTCCCATTCCTCTTATGAGGGAACCTTGTAAAGTGCAAAGGAGTTGTGGGACTTTAGGATCTGTTGCCAGTGAAGAGGGGCAAGTTATTTCTGGGAGTGAATGTACAAAAATTAAAGTGGAATCTCAGCCTGCTTTACTTGGTGAAGGGAAAAATGTGGGAGGGTTTTCAAATCTTCAATCCCCTTTTAAATTTGATGAGACAGTTATTGACTCATGCCATGAACTAAAAACTGAGTTGGATCAGTCAAGAAAAATGCATCTTCTCCCTGGCTTGTTGAGTAATCAATCTTGGACAGACATTGAATCTAATAGCTTTCTCCTTAGCCTTTATGTATTTGGGAAGAATCTTAATTTATTGAAGAGATTTGTTGGCAGTAAAAATATGGGAGACATACTGTCTTTTTATTATGGAAAATTTTATAGGTCTGAAGGACATTGCCGATGGTCAAAGTGCCGGAAGTTGAGAGCTAGGTGGTGTATATGGGGCCAGAAAATATTCACAGGATGGAGGCAACAAGAACTGCTATCACGATTATCTTCCCAAGTGTCAGGGGAGTGTCAAACCATGTTGGTTGAGCTCTCTAGGAATTTTAGGGAAGGTAAGATGCCGTTTGAAGAATATGTTTTTTCTGTAAAGGATGCTGTTGGCATTGACTTGCTTATAACTGCAATTGGTATTGGCAAAGGAAAGCAAGATCTAACTGGGACTGCTGTTAAGCCAAAAAAGACTAATCACACCTTCTCTCTTCAATCTGAAATACCAATTGGCAAAGCTTGCTCCTTTCTTACATCTGCAGACATAATCAAGTTTCTCACAGGAGATTTCAGATTAAGTAAAGCTAGATCCAGTGATCTCTTCTGGGAAGCTGTTTGGCCTCGTCTCTTGGCGAAAGGGTGGCACTCTGAACAGCCTAAGGATCATGCTGTTTCTGGTTCAAAAGGATCTTTAGTTTTTCTTATACCTGGTATTAAGAAATTTTCAAGCAGACTGATAAAAGGTAACCACTACTTTGATTCTATAAGTGATATATTGAATAAAGTAGCATCTGACCCACAGCTTCTTGAGATGAAAATTCAAGCAACTGAGGGCAATGTTGATAGAGAAAATGGACAGGATAAGAAAAACTTAGATGGTCTGTCAGATAAGCAACAAATTTGCTACCTTCAACCTCTCACTTTCAAGTGTCAAGATCTAATGAAATGTACAAATGTAGATACTAGCATAGTATATGATTTAGATCAATGTAAAGTGAGAGAGCTGAGAAGCTCATCTTTTCAAACTATGAGTATACCTACCACCTTGAGCCACTCTAGTGGATCTGAGCAAGGTACATCTAAAGAGACAGAAGATCAGGCTGAACACGCTAATTCTTCAAACCCCATAGAAGAATTCTCTGACAAGTGGGTGAACAAAGAGTTATCAGATTGTACTTGTATAACTGAGGCCCTCAACCCCACCAAAGAAGAAGAGATTTCAAGGGAGATCAATGAATATCAAGTCATTCAAAAAGTGACAGATAGCCCAAAATATTTGCCCCCCATCATGAAAAAGCAGAAGTTAACAGCTTGTAACCATGGAGAGGTTAGCTGCTGCATTGAAAGTACTTTTACAGGCAGAAAATTAGATTTAAATGAGTCTCCCTCACCATCATATCAGTGTGAAGCATCTGAGGACACTCCAAAAATAAGCAATGAAGACAATGATATTGAGAACCACCTGGTTGGAGAAGTTTCTGCAGAAAAACCTAAATCCAGGATGTTGTTTGACTTAAATCTTCCTCTCTTTTCACCTGAGTTAGAAATTGAAACAGAAGTACCATCCTCTATGGTCATACTACAAAATGATGACAATCAATATGAAGCTACATCTTCCTCTTCATCTGCGATAACCCAGCTCAATGAGACACAAGCGTTTCCTGTTGGTCATAAGGAGCAGCAACCTATCATTCTCAACCGCCGCCAGAGCACAAGGAACCGGCCATTGACCACAAAAGCATTGGAAGCTCTTGAGTATGGAATTCTCCACTTAAAGAGGAAGAGAAAGAATGCAGAGTCTTCACACAATAATTCAAAGTCCCAATGTTTACATGTAAGCATTGGAACAATTATTGGTGCAACTTATGATAATGACATTGGGAATGCCATTGGTGACATAAGAGCAGAGAAGGAAAATGTGATCCAGGCATATAACAGTGGCATCAATCTGAATAATTGTGAGGATCACTGTAATTTGTGA 2472 0.3948 MDVICFDDNKEGMELKSGVGFPTSDLSDMDDNFGDPQVLPRVGDQYQAEIPSLIAAPFLSQVTKNLRDSDMLESFPPGFPIPLMREPCKVQRSCGTLGSVASEEGQVISGSECTKIKVESQPALLGEGKNVGGFSNLQSPFKFDETVIDSCHELKTELDQSRKMHLLPGLLSNQSWTDIESNSFLLSLYVFGKNLNLLKRFVGSKNMGDILSFYYGKFYRSEGHCRWSKCRKLRARWCIWGQKIFTGWRQQELLSRLSSQVSGECQTMLVELSRNFREGKMPFEEYVFSVKDAVGIDLLITAIGIGKGKQDLTGTAVKPKKTNHTFSLQSEIPIGKACSFLTSADIIKFLTGDFRLSKARSSDLFWEAVWPRLLAKGWHSEQPKDHAVSGSKGSLVFLIPGIKKFSSRLIKGNHYFDSISDILNKVASDPQLLEMKIQATEGNVDRENGQDKKNLDGLSDKQQICYLQPLTFKCQDLMKCTNVDTSIVYDLDQCKVRELRSSSFQTMSIPTTLSHSSGSEQGTSKETEDQAEHANSSNPIEEFSDKWVNKELSDCTCITEALNPTKEEEISREINEYQVIQKVTDSPKYLPPIMKKQKLTACNHGEVSCCIESTFTGRKLDLNESPSPSYQCEASEDTPKISNEDNDIENHLVGEVSAEKPKSRMLFDLNLPLFSPELEIETEVPSSMVILQNDDNQYEATSSSSSAITQLNETQAFPVGHKEQQPIILNRRQSTRNRPLTTKALEALEYGILHLKRKRKNAESSHNNSKSQCLHVSIGTIIGATYDNDIGNAIGDIRAEKENVIQAYNSGINLNNCEDHCNL. 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06772 823 MobiDBLite consensus disorder prediction 507 542 - -
Seca8g06772 823 PANTHER ATROPHIN-RELATED 27 763 - -
Seca8g06772 823 MobiDBLite consensus disorder prediction 622 637 - -
Seca8g06772 823 MobiDBLite consensus disorder prediction 622 645 - -
Seca8g06772 823 SUPERFAMILY Homeodomain-like 162 216 IPR009057 -
Seca8g06772 823 MobiDBLite consensus disorder prediction 507 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06772 Seca-Chr8 162562547 162567525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06772 - - lang:109346591 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06772 8 162562547 162567525 Seca8g06772 8 162562547 162567525 ECH